RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SMIM20Q8N5G0 67 aa9.31□□□□□ -0.92
CPNE4-201ENST00000429747 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
CPNE4-201ENST00000429747 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
CPNE4-201ENST00000429747 Q9HAA7 133 aa9.31□□□□□ -0.92
CPNE4-201ENST00000429747 UBE2D3P61077 147 aa9.3□□□□□ -0.92
CPNE4-201ENST00000429747 UBE2D2P62837 147 aa9.3□□□□□ -0.92
CPNE4-201ENST00000429747 TMEM263Q8WUH6 116 aaKnown RBP9.3□□□□□ -0.92
CPNE4-201ENST00000429747 TRBV30A0A0K0K1B3 111 aa9.3□□□□□ -0.92
CPNE4-201ENST00000429747 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
CPNE4-201ENST00000429747 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
CPNE4-201ENST00000429747 NDUFV3P56181 108 aaKnown RBP9.3□□□□□ -0.92
CPNE4-201ENST00000429747 PYGO1Q9Y3Y4 419 aa9.29□□□□□ -0.92
CPNE4-201ENST00000429747 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
CPNE4-201ENST00000429747 TRAV4A0A0B4J268 109 aa9.28□□□□□ -0.92
CPNE4-201ENST00000429747 Q6ZSV7 163 aa9.28□□□□□ -0.92
CPNE4-201ENST00000429747 LINC00308Q8TCZ7 52 aa9.28□□□□□ -0.92
CPNE4-201ENST00000429747 ACYP1P07311 99 aa9.28□□□□□ -0.92
CPNE4-201ENST00000429747 CRLF1O75462 422 aa9.27□□□□□ -0.92
CPNE4-201ENST00000429747 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.92
CPNE4-201ENST00000429747 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.92
CPNE4-201ENST00000429747 ANGP03950 147 aaKnown RBP9.27□□□□□ -0.93
CPNE4-201ENST00000429747 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.93
CPNE4-201ENST00000429747 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
CPNE4-201ENST00000429747 DEFB114Q30KQ6 69 aa9.27□□□□□ -0.93
CPNE4-201ENST00000429747 DEFB113Q30KQ7 82 aa9.27□□□□□ -0.93
CPNE4-201ENST00000429747 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 BOD1L1Q8NFC6 3051 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 IGLV10-54A0A075B6I4 117 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 COX7A2LO14548 114 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 LECT2O14960 151 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 UBE2D4Q9Y2X8 147 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 MRPS36P82909 103 aaKnown RBP9.26□□□□□ -0.93
CPNE4-201ENST00000429747 ZNF462Q96JM2 2506 aa9.26□□□□□ -0.93
CPNE4-201ENST00000429747 TRBV10-1A0A0K0K1A3 114 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 F5H768 121 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 GYPEP15421 78 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 LINC00315P59091 139 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 ESM1Q9NQ30 184 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 Q6YL49 198 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 C16orf74Q96GX8 76 aa9.25□□□□□ -0.93
CPNE4-201ENST00000429747 ATP5G1P05496 136 aa9.24□□□□□ -0.93
CPNE4-201ENST00000429747 NDUFA1O15239 70 aa9.24□□□□□ -0.93
CPNE4-201ENST00000429747 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
CPNE4-201ENST00000429747 HIST2H2BCQ6DN03 193 aa9.24□□□□□ -0.93
CPNE4-201ENST00000429747 CITED2Q99967 270 aaPredicted RBP9.24□□□□□ -0.93
CPNE4-201ENST00000429747 MAP1AP78559 2803 aaPredicted RBP9.24□□□□□ -0.93
CPNE4-201ENST00000429747 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
CPNE4-201ENST00000429747 PRORYQ9H606 182 aa9.24□□□□□ -0.93
CPNE4-201ENST00000429747 ZNF702PQ9H963 129 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 ACANP16112 2415 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 NDUFA7O95182 113 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 TIRAPP58753 221 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 DAD1P61803 113 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 H7C423 109 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 SPANXDQ9BXN6 97 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 SPANXCQ9NY87 97 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 DOPEY1Q5JWR5 2465 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 H0YGX0 51 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 LST1O00453 97 aa9.23□□□□□ -0.93
CPNE4-201ENST00000429747 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
CPNE4-201ENST00000429747 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
CPNE4-201ENST00000429747 HAMPP81172 84 aa9.22□□□□□ -0.93
CPNE4-201ENST00000429747 IGHV4-31P0DP07 118 aa9.21□□□□□ -0.93
CPNE4-201ENST00000429747 CENPEQ02224 2701 aa9.21□□□□□ -0.93
CPNE4-201ENST00000429747 COL27A1Q8IZC6 1860 aaPredicted RBP9.21□□□□□ -0.93
CPNE4-201ENST00000429747 TRAV25A0A0B4J276 109 aa9.21□□□□□ -0.93
CPNE4-201ENST00000429747 UBL5Q9BZL1 73 aa9.21□□□□□ -0.93
CPNE4-201ENST00000429747 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.93
CPNE4-201ENST00000429747 ANKRD17O75179 2603 aaKnown RBP9.21□□□□□ -0.94
CPNE4-201ENST00000429747 COL6A3P12111 3177 aa9.21□□□□□ -0.94
CPNE4-201ENST00000429747 ZNF292O60281 2723 aa9.2□□□□□ -0.94
CPNE4-201ENST00000429747 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
CPNE4-201ENST00000429747 USP34Q70CQ2 3546 aa9.2□□□□□ -0.94
CPNE4-201ENST00000429747 Q6ZSN1 163 aa9.2□□□□□ -0.94
CPNE4-201ENST00000429747 CCDC179H3BU77 68 aa9.19□□□□□ -0.94
CPNE4-201ENST00000429747 DEFB4AO15263 64 aa9.19□□□□□ -0.94
CPNE4-201ENST00000429747 TIMM17BO60830 172 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 A0A1B0GX51 115 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 GHRHP01286 108 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 LINC00242Q5T6M2 205 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 AMELXQ99217 191 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 DNAJC9-AS1A6NH13 148 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 WFDC10AQ9H1F0 79 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 ADGRG4Q8IZF6 3080 aa9.18□□□□□ -0.94
CPNE4-201ENST00000429747 BRI3O95415 125 aa9.17□□□□□ -0.94
CPNE4-201ENST00000429747 TRACP01848 142 aa9.17□□□□□ -0.94
CPNE4-201ENST00000429747 SLPIP03973 132 aa9.17□□□□□ -0.94
CPNE4-201ENST00000429747 COX6A2Q02221 97 aa9.17□□□□□ -0.94
CPNE4-201ENST00000429747 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
CPNE4-201ENST00000429747 Q9UF83 564 aa9.16□□□□□ -0.94
CPNE4-201ENST00000429747 LINC00694P0DN24 101 aa9.16□□□□□ -0.94
CPNE4-201ENST00000429747 AKAP13Q12802 2813 aa9.15□□□□□ -0.94
CPNE4-201ENST00000429747 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.95
CPNE4-201ENST00000429747 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.95
CPNE4-201ENST00000429747 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms