RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SPANXB1Q9NS25 103 aaPredicted RBP11.55□□□□□ -0.56
MBD4-203ENST00000429544 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 A6NJY4 79 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 NTM-AS1Q6ZSK4 140 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
MBD4-203ENST00000429544 HIVEP1P15822 2718 aa11.53□□□□□ -0.56
MBD4-203ENST00000429544 TRGV4A0A0C4DH28 118 aa11.53□□□□□ -0.56
MBD4-203ENST00000429544 CRLF1O75462 422 aa11.53□□□□□ -0.56
MBD4-203ENST00000429544 UBE2D1P51668 147 aa11.53□□□□□ -0.56
MBD4-203ENST00000429544 C9orf66Q5T8R8 295 aa11.53□□□□□ -0.56
MBD4-203ENST00000429544 IGHV3-30P01768 117 aa11.52□□□□□ -0.56
MBD4-203ENST00000429544 IGHV3-30-5P0DP03 117 aa11.52□□□□□ -0.56
MBD4-203ENST00000429544 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.56
MBD4-203ENST00000429544 VWFP04275 2813 aa11.52□□□□□ -0.57
MBD4-203ENST00000429544 SPINK8P0C7L1 97 aa11.52□□□□□ -0.57
MBD4-203ENST00000429544 INSL3P51460 131 aa11.51□□□□□ -0.57
MBD4-203ENST00000429544 C10orf126Q8N4M7 172 aa11.51□□□□□ -0.57
MBD4-203ENST00000429544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.51□□□□□ -0.57
MBD4-203ENST00000429544 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
MBD4-203ENST00000429544 SBSPONQ8IVN8 264 aa11.51□□□□□ -0.57
MBD4-203ENST00000429544 TRBV6-4A0A1B0GX49 114 aa11.5□□□□□ -0.57
MBD4-203ENST00000429544 APOMO95445 188 aa11.5□□□□□ -0.57
MBD4-203ENST00000429544 PGPEP1Q9NXJ5 209 aa11.5□□□□□ -0.57
MBD4-203ENST00000429544 CIDEAO60543 219 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 A8MZ25 164 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 FOSL1P15407 271 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 FHL2Q14192 279 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 TENM1Q9UKZ4 2725 aa11.49□□□□□ -0.57
MBD4-203ENST00000429544 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
MBD4-203ENST00000429544 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
MBD4-203ENST00000429544 TIRAPP58753 221 aa11.48□□□□□ -0.57
MBD4-203ENST00000429544 COX6A2Q02221 97 aa11.48□□□□□ -0.57
MBD4-203ENST00000429544 TMEM243Q9BU79 118 aa11.48□□□□□ -0.57
MBD4-203ENST00000429544 UBE2L6O14933 153 aa11.47□□□□□ -0.57
MBD4-203ENST00000429544 CITED1Q99966 193 aa11.47□□□□□ -0.57
MBD4-203ENST00000429544 GTSF1LQ9H1H1 148 aa11.47□□□□□ -0.57
MBD4-203ENST00000429544 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
MBD4-203ENST00000429544 TMEM238C9JI98 176 aa11.47□□□□□ -0.57
MBD4-203ENST00000429544 CSDC2Q9Y534 153 aaKnown RBP11.47□□□□□ -0.57
MBD4-203ENST00000429544 X6R8D5 127 aa11.46□□□□□ -0.57
MBD4-203ENST00000429544 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.58
MBD4-203ENST00000429544 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.58
MBD4-203ENST00000429544 TSPAN13O95857 204 aa11.46□□□□□ -0.58
MBD4-203ENST00000429544 CFC1BP0CG36 223 aa11.46□□□□□ -0.58
MBD4-203ENST00000429544 CFC1P0CG37 223 aa11.46□□□□□ -0.58
MBD4-203ENST00000429544 LINC00242Q5T6M2 205 aa11.46□□□□□ -0.58
MBD4-203ENST00000429544 SMAGPQ0VAQ4 97 aa11.45□□□□□ -0.58
MBD4-203ENST00000429544 OCIAD2Q56VL3 154 aa11.45□□□□□ -0.58
MBD4-203ENST00000429544 KIR2DL5BQ8NHK3 375 aa11.45□□□□□ -0.58
MBD4-203ENST00000429544 MUSTN1Q8IVN3 82 aa11.45□□□□□ -0.58
MBD4-203ENST00000429544 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
MBD4-203ENST00000429544 HERVK_113P63121 156 aa11.44□□□□□ -0.58
MBD4-203ENST00000429544 A4D1N5 150 aa11.44□□□□□ -0.58
MBD4-203ENST00000429544 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
MBD4-203ENST00000429544 ZFAND6Q6FIF0 208 aa11.43□□□□□ -0.58
MBD4-203ENST00000429544 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
MBD4-203ENST00000429544 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
MBD4-203ENST00000429544 LITAFQ99732 161 aa11.43□□□□□ -0.58
MBD4-203ENST00000429544 ATRQ13535 2644 aa11.42□□□□□ -0.58
MBD4-203ENST00000429544 H3BMG7 143 aa11.42□□□□□ -0.58
MBD4-203ENST00000429544 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
MBD4-203ENST00000429544 GAGE6Q13070 117 aa11.42□□□□□ -0.58
MBD4-203ENST00000429544 DEFB135Q30KP9 77 aa11.42□□□□□ -0.58
MBD4-203ENST00000429544 FAM19A3Q7Z5A8 133 aa11.42□□□□□ -0.58
MBD4-203ENST00000429544 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
MBD4-203ENST00000429544 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
MBD4-203ENST00000429544 RBX1P62877 108 aa11.41□□□□□ -0.58
MBD4-203ENST00000429544 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
MBD4-203ENST00000429544 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
MBD4-203ENST00000429544 EIF4EBP3O60516 100 aaPredicted RBP11.41□□□□□ -0.58
MBD4-203ENST00000429544 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
MBD4-203ENST00000429544 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
MBD4-203ENST00000429544 H7C423 109 aa11.4□□□□□ -0.58
MBD4-203ENST00000429544 ADAMTSL4-AS1Q5T5F5 129 aa11.4□□□□□ -0.58
MBD4-203ENST00000429544 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.58
MBD4-203ENST00000429544 FAM222AQ5U5X8 452 aa11.4□□□□□ -0.59
MBD4-203ENST00000429544 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
MBD4-203ENST00000429544 GYPEP15421 78 aa11.39□□□□□ -0.59
MBD4-203ENST00000429544 CHCHD5Q9BSY4 110 aa11.39□□□□□ -0.59
MBD4-203ENST00000429544 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
MBD4-203ENST00000429544 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
MBD4-203ENST00000429544 NBEAL2Q6ZNJ1 2754 aa11.39□□□□□ -0.59
MBD4-203ENST00000429544 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
MBD4-203ENST00000429544 NDUFA1O15239 70 aa11.38□□□□□ -0.59
MBD4-203ENST00000429544 DEFB4AO15263 64 aa11.38□□□□□ -0.59
MBD4-203ENST00000429544 PRSS2P07478 247 aa11.38□□□□□ -0.59
MBD4-203ENST00000429544 APOC4P55056 127 aa11.38□□□□□ -0.59
MBD4-203ENST00000429544 MTURNQ8N3F0 131 aa11.38□□□□□ -0.59
MBD4-203ENST00000429544 NPC2P61916 151 aa11.37□□□□□ -0.59
MBD4-203ENST00000429544 MIAQ16674 131 aa11.37□□□□□ -0.59
MBD4-203ENST00000429544 IGLV4-60A0A075B6I1 120 aa11.37□□□□□ -0.59
MBD4-203ENST00000429544 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
MBD4-203ENST00000429544 K7ERU9 68 aa11.37□□□□□ -0.59
MBD4-203ENST00000429544 IGKV3OR2-268A0A0C4DH90 116 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms