RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 UBE2D1P51668 147 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 Q6JHZ5 121 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 CDKN2A-AS1Q9UH64 79 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 LYPD6Q86Y78 171 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 MLST8Q9BVC4 326 aa10.86□□□□□ -0.67
PTPN13-203ENST00000427191 C1orf158Q8N1D5 194 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 ZNF524Q96C55 264 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 TRBV6-5A0A0K0K1A5 114 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 ODF3BA8MYP8 253 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 Q8N7P7 452 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
PTPN13-203ENST00000427191 CCDC140Q96MF4 163 aa10.84□□□□□ -0.67
PTPN13-203ENST00000427191 M0QY20 66 aa10.84□□□□□ -0.67
PTPN13-203ENST00000427191 CFAP126Q5VTH2 177 aa10.84□□□□□ -0.67
PTPN13-203ENST00000427191 K7EQG2 157 aa10.83□□□□□ -0.67
PTPN13-203ENST00000427191 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
PTPN13-203ENST00000427191 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
PTPN13-203ENST00000427191 DNAJC9-AS1A6NH13 148 aa10.83□□□□□ -0.68
PTPN13-203ENST00000427191 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
PTPN13-203ENST00000427191 WFDC11Q8NEX6 87 aa10.82□□□□□ -0.68
PTPN13-203ENST00000427191 Q6ZTI0 123 aa10.82□□□□□ -0.68
PTPN13-203ENST00000427191 DEFB131BA0A096LNP1 70 aa10.82□□□□□ -0.68
PTPN13-203ENST00000427191 C6orf99Q4VX62 202 aa10.82□□□□□ -0.68
PTPN13-203ENST00000427191 SPRNQ5BIV9 151 aa10.82□□□□□ -0.68
PTPN13-203ENST00000427191 LOC107984640A0A0U1RRK4 108 aa10.81□□□□□ -0.68
PTPN13-203ENST00000427191 ZFP36P26651 326 aaKnown RBP10.81□□□□□ -0.68
PTPN13-203ENST00000427191 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
PTPN13-203ENST00000427191 NRACQ8N912 160 aa10.81□□□□□ -0.68
PTPN13-203ENST00000427191 C3orf84H3BNL1 204 aa10.81□□□□□ -0.68
PTPN13-203ENST00000427191 CEMP1Q6PRD7 247 aaPredicted RBP10.81□□□□□ -0.68
PTPN13-203ENST00000427191 UBE2D4Q9Y2X8 147 aa10.8□□□□□ -0.68
PTPN13-203ENST00000427191 GRNP28799 593 aaKnown RBP10.8□□□□□ -0.68
PTPN13-203ENST00000427191 IGLV2-8P01709 118 aa10.8□□□□□ -0.68
PTPN13-203ENST00000427191 EIF4EBP1Q13541 118 aaPredicted RBP10.8□□□□□ -0.68
PTPN13-203ENST00000427191 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
PTPN13-203ENST00000427191 DEFB4AO15263 64 aa10.79□□□□□ -0.68
PTPN13-203ENST00000427191 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
PTPN13-203ENST00000427191 DEFB114Q30KQ6 69 aa10.79□□□□□ -0.68
PTPN13-203ENST00000427191 TRAV10A0A0B4J240 114 aa10.79□□□□□ -0.68
PTPN13-203ENST00000427191 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
PTPN13-203ENST00000427191 MRPS12O15235 138 aaKnown RBP10.78□□□□□ -0.68
PTPN13-203ENST00000427191 ADORA2A-AS1P86434 159 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 PTPRSQ13332 1948 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
PTPN13-203ENST00000427191 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 CPAMD8Q8IZJ3 1885 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 UBE2D3P61077 147 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 E7EUB6 86 aa10.78□□□□□ -0.68
PTPN13-203ENST00000427191 SNURFQ9Y675 71 aa10.77□□□□□ -0.68
PTPN13-203ENST00000427191 LY6LH3BQJ8 138 aa10.77□□□□□ -0.69
PTPN13-203ENST00000427191 WFDC10AQ9H1F0 79 aa10.77□□□□□ -0.69
PTPN13-203ENST00000427191 ZNF73O43830 326 aaPredicted RBP10.77□□□□□ -0.69
PTPN13-203ENST00000427191 ADAMTS20P59510 1910 aa10.77□□□□□ -0.69
PTPN13-203ENST00000427191 RAI1Q7Z5J4 1906 aaPredicted RBP10.77□□□□□ -0.69
PTPN13-203ENST00000427191 LELP1Q5T871 98 aa10.77□□□□□ -0.69
PTPN13-203ENST00000427191 Q6YL49 198 aa10.77□□□□□ -0.69
PTPN13-203ENST00000427191 Q8IZM0 81 aa10.76□□□□□ -0.69
PTPN13-203ENST00000427191 F8WDY8 70 aa10.76□□□□□ -0.69
PTPN13-203ENST00000427191 LTBP2Q14767 1821 aa10.76□□□□□ -0.69
PTPN13-203ENST00000427191 SLPIP03973 132 aa10.76□□□□□ -0.69
PTPN13-203ENST00000427191 PMAIP1Q13794 54 aa10.76□□□□□ -0.69
PTPN13-203ENST00000427191 EXPH5Q8NEV8 1989 aa10.75□□□□□ -0.69
PTPN13-203ENST00000427191 DOPEY1Q5JWR5 2465 aa10.75□□□□□ -0.69
PTPN13-203ENST00000427191 Q6ZQY7 126 aa10.75□□□□□ -0.69
PTPN13-203ENST00000427191 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
PTPN13-203ENST00000427191 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
PTPN13-203ENST00000427191 TP53TG3Q9ULZ0 132 aa10.74□□□□□ -0.69
PTPN13-203ENST00000427191 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
PTPN13-203ENST00000427191 EBI3Q14213 229 aa10.73□□□□□ -0.69
PTPN13-203ENST00000427191 BDP1A6H8Y1 2624 aa10.73□□□□□ -0.69
PTPN13-203ENST00000427191 Q6ZVQ6 151 aa10.73□□□□□ -0.69
PTPN13-203ENST00000427191 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
PTPN13-203ENST00000427191 NRGNQ92686 78 aa10.73□□□□□ -0.69
PTPN13-203ENST00000427191 WFDC13Q8IUB5 93 aa10.73□□□□□ -0.69
PTPN13-203ENST00000427191 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
PTPN13-203ENST00000427191 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
PTPN13-203ENST00000427191 RBX1P62877 108 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 Q8N976 141 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 A0A096LNI7 61 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 ABCA2Q9BZC7 2435 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 PRYO14603 147 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 TSHBP01222 138 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
PTPN13-203ENST00000427191 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.7
PTPN13-203ENST00000427191 RPL28P46779 137 aaKnown RBP10.7□□□□□ -0.7
PTPN13-203ENST00000427191 LINC00526Q96FQ7 95 aa10.7□□□□□ -0.7
PTPN13-203ENST00000427191 MYO9AB2RTY4 2548 aa10.7□□□□□ -0.7
PTPN13-203ENST00000427191 IGKV2-28A0A075B6P5 120 aa10.69□□□□□ -0.7
PTPN13-203ENST00000427191 IGKV2D-28P01615 120 aa10.69□□□□□ -0.7
PTPN13-203ENST00000427191 FRMD6-AS1P0C7T7 363 aa10.69□□□□□ -0.7
PTPN13-203ENST00000427191 NTM-AS1Q6ZSK4 140 aa10.69□□□□□ -0.7
PTPN13-203ENST00000427191 MAPKAPK5-AS1Q8N8E1 139 aa10.69□□□□□ -0.7
PTPN13-203ENST00000427191 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
PTPN13-203ENST00000427191 NOTCH2Q04721 2471 aa10.68□□□□□ -0.7
PTPN13-203ENST00000427191 CCDC179H3BU77 68 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms