RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 TDRG1Q3Y452 100 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 FAM229BQ4G0N7 80 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 PSMG4Q5JS54 123 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 SAPCD1Q5SSQ6 148 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 MRPL54Q6P161 138 aaKnown RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 SDIM1Q6ZPB5 146 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 MED13LQ71F56 2210 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 VMO1Q7Z5L0 202 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 Q86TA4 180 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 BAGE3Q86Y29 109 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 DYNAPQ8N1N2 210 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 DEFB125Q8N687 156 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 OR11H1Q8NG94 326 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 BORCS7Q96B45 105 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 MUC4Q99102 2169 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 HSPB9Q9BQS6 159 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 SLC50A1Q9BRV3 221 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 VAMP8Q9BV40 100 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 SNHG12Q9BXW3 62 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 CNFNQ9BYD5 112 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 CEP295Q9C0D2 2601 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 SPTBN4Q9H254 2564 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 MS4A6AQ9H2W1 248 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 PRO1933Q9H354 126 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 UQCR10Q9UDW1 63 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 MRPS16Q9Y3D3 137 aaKnown RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 ZFHX3Q15911 3703 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.01□□□□□ -2.25
PTPRC-208ENST00000427110 TRAV8-1A0A0A6YYK1 113 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 TRBV7-1A0A0A6YYK4 115 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 IGHV3-73A0A0B4J1V6 119 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 IGHV1-24A0A0C4DH33 117 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 CLPSL1A2RUU4 121 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM189A5PLL7 270 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 OR4C46A6NHA9 309 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 FAM223BA6NKX1 122 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 FABP5P3A8MUU1 101 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 H3BUA1 57 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 SYS1-DBNDD2H3BUS1 97 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 J3QKU1 62 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 K7EMI3 77 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 M0R2Z0 102 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 M0R3E3 92 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 NPFFO15130 113 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 DLEU1O43261 78 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 SPINK4O60575 86 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 LEPROTL1O95214 131 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 CNIH1O95406 144 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 PPBPP02775 128 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 ARMS2P0C7Q2 107 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 CSN1S1P47710 185 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 TCL1AP56279 114 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 KRTDAPP60985 99 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 GNG5P63218 68 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 HIST1H1AQ02539 215 aaPredicted RBP1.01□□□□□ -2.25
PTPRC-208ENST00000427110 KLRD1Q13241 179 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 LGALS9BQ3B8N2 356 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 MRPL51Q4U2R6 128 aaKnown RBP1.01□□□□□ -2.25
PTPRC-208ENST00000427110 SPATA45Q537H7 98 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 COL5A1-AS1Q5SY13 56 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 LINC01545Q5VT33 79 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 LGALS9CQ6DKI2 356 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 UNQ5815/PRO19632Q6UWF5 114 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF705AQ6ZN79 300 aaPredicted RBP1.01□□□□□ -2.25
PTPRC-208ENST00000427110 GOLT1AQ6ZVE7 132 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 FAM223AQ8IWN6 122 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 EXOC3-AS1Q8N2X6 119 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 FAM19A2Q8N3H0 131 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 C5orf56Q8N8D9 126 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 Q8NDZ9 215 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 OR2D3Q8NGH3 330 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 OR10AG1Q8NH19 301 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 ZC2HC1AQ96GY0 325 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 PMCHL2Q9BQD1 86 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 FAM103A1Q9BTL3 118 aaKnown RBP1.01□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM70Q9BUB7 260 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM191AQ9H0A3 160 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 ST20Q9HBF5 79 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 RABAC1Q9UI14 185 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 HSPB8Q9UJY1 196 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 LAMTOR2Q9Y2Q5 125 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 LENEPQ9Y5L5 61 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 IGF2RP11717 2491 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 SPTAN1Q13813 2472 aaKnown RBP1.01□□□□□ -2.25
PTPRC-208ENST00000427110 RELNP78509 3460 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 CSMD1Q96PZ7 3565 aa1.01□□□□□ -2.25
PTPRC-208ENST00000427110 CACNA1AO00555 2505 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 AKAP6Q13023 2319 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 CSPG4Q6UVK1 2322 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 VPS13CQ709C8 3753 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 ANKRD17O75179 2603 aaKnown RBP1□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM213A2RRL7 107 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 OR2T8A6NH00 312 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 LINC01549A6NIU2 74 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 KNCNA6PVL3 124 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 D6R8Y8 96 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 M0R381 172 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 NDUFA4O00483 81 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 LY6HO94772 140 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms