RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 TRAV26-1A0A087WT03 109 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 IGHV4-31P0DP07 118 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 ZNF415Q09FC8 603 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
ERCC3-202ENST00000426778 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
ERCC3-202ENST00000426778 TRGV1A0A0A0MS02 117 aa10.38□□□□□ -0.75
ERCC3-202ENST00000426778 TRAV13-1A0A0B4J241 112 aa10.38□□□□□ -0.75
ERCC3-202ENST00000426778 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
ERCC3-202ENST00000426778 PYGO1Q9Y3Y4 419 aa10.38□□□□□ -0.75
ERCC3-202ENST00000426778 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.37□□□□□ -0.75
ERCC3-202ENST00000426778 CRLF1O75462 422 aa10.37□□□□□ -0.75
ERCC3-202ENST00000426778 ICOSQ9Y6W8 199 aa10.37□□□□□ -0.75
ERCC3-202ENST00000426778 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
ERCC3-202ENST00000426778 TINCRA0A1B0GVN0 87 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
ERCC3-202ENST00000426778 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 DSCR9P59020 149 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 MIAQ16674 131 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 RNF183Q96D59 192 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 HIVEP2P31629 2446 aa10.35□□□□□ -0.75
ERCC3-202ENST00000426778 TENM4Q6N022 2769 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 IGKV3OR2-268A0A0C4DH90 116 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 Q6ZTI0 123 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 Q9H8V8 135 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 TRAV4A0A0B4J268 109 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 INSP01308 110 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 Q96MF0 132 aa10.34□□□□□ -0.75
ERCC3-202ENST00000426778 BBC3Q96PG8 261 aaPredicted RBP10.34□□□□□ -0.75
ERCC3-202ENST00000426778 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 VWFP04275 2813 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 H7C423 109 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 GAGE4Q13068 117 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 GAGE5Q13069 117 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 PEMTQ9UBM1 199 aa10.33□□□□□ -0.76
ERCC3-202ENST00000426778 J3QLI3 93 aa10.32□□□□□ -0.76
ERCC3-202ENST00000426778 TRBV30A0A0K0K1B3 111 aa10.32□□□□□ -0.76
ERCC3-202ENST00000426778 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
ERCC3-202ENST00000426778 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
ERCC3-202ENST00000426778 STHQ8IWL8 128 aa10.31□□□□□ -0.76
ERCC3-202ENST00000426778 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 FSHBP01225 129 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 TTC32Q5I0X7 151 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 LINC00242Q5T6M2 205 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 HIST2H2BCQ6DN03 193 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 Q8N2B8 174 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 RNF152Q8N8N0 203 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 UBE2WQ96B02 151 aa10.3□□□□□ -0.76
ERCC3-202ENST00000426778 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
ERCC3-202ENST00000426778 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
ERCC3-202ENST00000426778 TEX29Q8N6K0 151 aa10.29□□□□□ -0.76
ERCC3-202ENST00000426778 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
ERCC3-202ENST00000426778 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
ERCC3-202ENST00000426778 RS1O15537 224 aa10.29□□□□□ -0.76
ERCC3-202ENST00000426778 SOSTDC1Q6X4U4 206 aa10.29□□□□□ -0.76
ERCC3-202ENST00000426778 EDA2RQ9HAV5 297 aa10.29□□□□□ -0.76
ERCC3-202ENST00000426778 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
ERCC3-202ENST00000426778 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
ERCC3-202ENST00000426778 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
ERCC3-202ENST00000426778 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
ERCC3-202ENST00000426778 A8MTW9 85 aa10.27□□□□□ -0.76
ERCC3-202ENST00000426778 SNCGO76070 127 aa10.27□□□□□ -0.76
ERCC3-202ENST00000426778 COX6CP09669 75 aa10.27□□□□□ -0.76
ERCC3-202ENST00000426778 BEAN1Q3B7T3 259 aa10.27□□□□□ -0.77
ERCC3-202ENST00000426778 PRIMA1Q86XR5 153 aa10.27□□□□□ -0.77
ERCC3-202ENST00000426778 LINC00308Q8TCZ7 52 aa10.27□□□□□ -0.77
ERCC3-202ENST00000426778 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
ERCC3-202ENST00000426778 C15orf53Q8NAA6 179 aa10.27□□□□□ -0.77
ERCC3-202ENST00000426778 SMIM1B2RUZ4 78 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 NDUFA1O15239 70 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE7O76087 117 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
ERCC3-202ENST00000426778 CITED1Q99966 193 aa10.25□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
ERCC3-202ENST00000426778 LST1O00453 97 aa10.24□□□□□ -0.77
ERCC3-202ENST00000426778 K7EQD1 137 aa10.24□□□□□ -0.77
ERCC3-202ENST00000426778 RPL36AP83881 106 aaKnown RBP10.24□□□□□ -0.77
ERCC3-202ENST00000426778 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
ERCC3-202ENST00000426778 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
ERCC3-202ENST00000426778 RPL36ALQ969Q0 106 aaKnown RBP10.24□□□□□ -0.77
ERCC3-202ENST00000426778 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
ERCC3-202ENST00000426778 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
ERCC3-202ENST00000426778 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
ERCC3-202ENST00000426778 TRGV2A0A075B6R0 118 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms