RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ADARB2-AS1A8MUL3 147 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 EIF4EBP3O60516 100 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-205ENST00000425443 OXTP01178 125 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 FSHBP01225 129 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 CEMP1Q6PRD7 247 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-205ENST00000425443 C3orf22Q8N5N4 141 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 C9orf85Q96MD7 179 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 TRAV2A0A0B4J234 112 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 HERVK_113P61574 105 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
COL12A1-205ENST00000425443 UBR5O95071 2799 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-205ENST00000425443 Q5XG85 94 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 Q6Q795 121 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 RNF152Q8N8N0 203 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 RETNQ9HD89 108 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 Q9UF83 564 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 NOTCH2Q04721 2471 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 CFC1P0CG37 223 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 NDUFA11Q86Y39 141 aa9.53□□□□□ -0.88
COL12A1-205ENST00000425443 FLNAP21333 2647 aaKnown RBP9.52□□□□□ -0.88
COL12A1-205ENST00000425443 IGHV3-30P01768 117 aa9.52□□□□□ -0.89
COL12A1-205ENST00000425443 IGHV3-30-5P0DP03 117 aa9.52□□□□□ -0.89
COL12A1-205ENST00000425443 UBE2D3P61077 147 aa9.52□□□□□ -0.89
COL12A1-205ENST00000425443 UBE2D2P62837 147 aa9.52□□□□□ -0.89
COL12A1-205ENST00000425443 TMEM61Q8N0U2 210 aa9.52□□□□□ -0.89
COL12A1-205ENST00000425443 FN1P02751 2386 aaKnown RBP9.51□□□□□ -0.89
COL12A1-205ENST00000425443 M0QY20 66 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
COL12A1-205ENST00000425443 TMEM86BQ8N661 226 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 TRBV27A0A0K0K1C4 114 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 TCL1BO95988 128 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 PAPPA-AS1Q5QFB9 102 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 C1orf195Q5TG92 126 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 IGHV3OR16-12A0A075B7B8 117 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
COL12A1-205ENST00000425443 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
COL12A1-205ENST00000425443 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
COL12A1-205ENST00000425443 A0A0J9YXV3 536 aa9.5□□□□□ -0.89
COL12A1-205ENST00000425443 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
COL12A1-205ENST00000425443 WFDC11Q8NEX6 87 aa9.5□□□□□ -0.89
COL12A1-205ENST00000425443 TIMM17AQ99595 171 aa9.5□□□□□ -0.89
COL12A1-205ENST00000425443 ITPR3Q14573 2671 aa9.5□□□□□ -0.89
COL12A1-205ENST00000425443 J3QQQ9 107 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 C4orf3Q8WVX3 66 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 H3BMM0 161 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 NPC2P61916 151 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 RPS28P62857 69 aaKnown RBP9.49□□□□□ -0.89
COL12A1-205ENST00000425443 SLC25A29Q8N8R3 303 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-205ENST00000425443 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
COL12A1-205ENST00000425443 I3L3M4 83 aa9.48□□□□□ -0.89
COL12A1-205ENST00000425443 APCP25054 2843 aa9.48□□□□□ -0.89
COL12A1-205ENST00000425443 NBPF19A0A087WUL8 3843 aa9.48□□□□□ -0.89
COL12A1-205ENST00000425443 Q1RN00 199 aa9.48□□□□□ -0.89
COL12A1-205ENST00000425443 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
COL12A1-205ENST00000425443 UQCRQO14949 82 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 A8MZ25 164 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 CD28P10747 220 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 PRSS2P07478 247 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 Q8N2B8 174 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
COL12A1-205ENST00000425443 TMEM223A0PJW6 202 aa9.46□□□□□ -0.89
COL12A1-205ENST00000425443 RHOHQ15669 191 aa9.46□□□□□ -0.89
COL12A1-205ENST00000425443 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.89
COL12A1-205ENST00000425443 PFN2P35080 140 aa9.46□□□□□ -0.9
COL12A1-205ENST00000425443 HIST2H2BCQ6DN03 193 aa9.46□□□□□ -0.9
COL12A1-205ENST00000425443 Q6ZSV7 163 aa9.46□□□□□ -0.9
COL12A1-205ENST00000425443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-205ENST00000425443 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-205ENST00000425443 ZNF22P17026 224 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-205ENST00000425443 NSUN5P1Q3KNT7 163 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 C20orf203Q8NBC4 194 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 M0R2P5 195 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 SLC25A20O43772 301 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 RBMY1BA6NDE4 496 aaKnown RBP9.45□□□□□ -0.9
COL12A1-205ENST00000425443 RBMY1EA6NEQ0 496 aaKnown RBP9.45□□□□□ -0.9
COL12A1-205ENST00000425443 DNAJC9-AS1A6NH13 148 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 RBMY1DP0C7P1 496 aaKnown RBP9.45□□□□□ -0.9
COL12A1-205ENST00000425443 TIRAPP58753 221 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 Q6ZSN1 163 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 XCL2Q9UBD3 114 aa9.45□□□□□ -0.9
COL12A1-205ENST00000425443 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
COL12A1-205ENST00000425443 HIVEP2P31629 2446 aa9.44□□□□□ -0.9
COL12A1-205ENST00000425443 STHQ8IWL8 128 aa9.44□□□□□ -0.9
COL12A1-205ENST00000425443 INSP01308 110 aa9.43□□□□□ -0.9
COL12A1-205ENST00000425443 TRACP01848 142 aa9.43□□□□□ -0.9
COL12A1-205ENST00000425443 MUSTN1Q8IVN3 82 aa9.43□□□□□ -0.9
COL12A1-205ENST00000425443 PRO1854Q9UHT4 67 aa9.43□□□□□ -0.9
COL12A1-205ENST00000425443 TMEM263Q8WUH6 116 aaKnown RBP9.42□□□□□ -0.9
COL12A1-205ENST00000425443 LEPROTO15243 131 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms