RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 FOXI1Q12951 378 aa13.46□□□□□ -0.25
RAF1-203ENST00000423275 YAE1D1Q9NRH1 226 aa13.46□□□□□ -0.25
RAF1-203ENST00000423275 HELZ2Q9BYK8 2649 aaKnown RBP13.45□□□□□ -0.26
RAF1-203ENST00000423275 TINCRA0A1B0GVN0 87 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 TEX29Q8N6K0 151 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 JMJD1CQ15652 2540 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 DNAJC30Q96LL9 226 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 CLUHP3Q96NS8 147 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 NOTCH3Q9UM47 2321 aa13.45□□□□□ -0.26
RAF1-203ENST00000423275 TRBV20-1A0A075B6N2 111 aa13.44□□□□□ -0.26
RAF1-203ENST00000423275 VSIG2Q96IQ7 327 aa13.44□□□□□ -0.26
RAF1-203ENST00000423275 SIGMAR1Q99720 223 aa13.44□□□□□ -0.26
RAF1-203ENST00000423275 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
RAF1-203ENST00000423275 A0A0B4J2C4 111 aa13.44□□□□□ -0.26
RAF1-203ENST00000423275 ADAMTSL4-AS1Q5T5F5 129 aa13.44□□□□□ -0.26
RAF1-203ENST00000423275 SMAGPQ0VAQ4 97 aa13.43□□□□□ -0.26
RAF1-203ENST00000423275 TRGV1A0A0A0MS02 117 aa13.43□□□□□ -0.26
RAF1-203ENST00000423275 ATP6V0E2Q8NHE4 81 aa13.43□□□□□ -0.26
RAF1-203ENST00000423275 ERG28Q9UKR5 140 aa13.43□□□□□ -0.26
RAF1-203ENST00000423275 WFDC10AQ9H1F0 79 aa13.42□□□□□ -0.26
RAF1-203ENST00000423275 PRSS2P07478 247 aa13.42□□□□□ -0.26
RAF1-203ENST00000423275 IL17DQ8TAD2 202 aa13.41□□□□□ -0.26
RAF1-203ENST00000423275 GEMIN7Q9H840 131 aaKnown RBP13.41□□□□□ -0.26
RAF1-203ENST00000423275 CDKN2A-AS1Q9UH64 79 aa13.41□□□□□ -0.26
RAF1-203ENST00000423275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.4□□□□□ -0.26
RAF1-203ENST00000423275 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.4□□□□□ -0.26
RAF1-203ENST00000423275 NPC2P61916 151 aa13.4□□□□□ -0.26
RAF1-203ENST00000423275 RNASE1P07998 156 aaKnown RBP13.39□□□□□ -0.27
RAF1-203ENST00000423275 GIG44P09565 113 aaPredicted RBP13.39□□□□□ -0.27
RAF1-203ENST00000423275 Q1RN00 199 aa13.39□□□□□ -0.27
RAF1-203ENST00000423275 Q6ZTI0 123 aa13.39□□□□□ -0.27
RAF1-203ENST00000423275 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
RAF1-203ENST00000423275 TEN1Q86WV5 123 aa13.39□□□□□ -0.27
RAF1-203ENST00000423275 SBSPONQ8IVN8 264 aa13.39□□□□□ -0.27
RAF1-203ENST00000423275 LINC00694P0DN24 101 aa13.38□□□□□ -0.27
RAF1-203ENST00000423275 DGAT2L7PQ6IED9 249 aa13.38□□□□□ -0.27
RAF1-203ENST00000423275 C16orf95Q9H693 158 aa13.38□□□□□ -0.27
RAF1-203ENST00000423275 COX6A2Q02221 97 aa13.37□□□□□ -0.27
RAF1-203ENST00000423275 SPANXDQ9BXN6 97 aa13.37□□□□□ -0.27
RAF1-203ENST00000423275 SPANXCQ9NY87 97 aa13.37□□□□□ -0.27
RAF1-203ENST00000423275 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
RAF1-203ENST00000423275 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
RAF1-203ENST00000423275 C9JAW5 83 aa13.36□□□□□ -0.27
RAF1-203ENST00000423275 NDUFA7O95182 113 aa13.36□□□□□ -0.27
RAF1-203ENST00000423275 MIAQ16674 131 aa13.36□□□□□ -0.27
RAF1-203ENST00000423275 ANKRD29Q8N6D5 301 aa13.36□□□□□ -0.27
RAF1-203ENST00000423275 PPDPFLQ8WWR9 84 aa13.36□□□□□ -0.27
RAF1-203ENST00000423275 DAND5Q8N907 189 aa13.35□□□□□ -0.27
RAF1-203ENST00000423275 TMEM101Q96IK0 257 aa13.35□□□□□ -0.27
RAF1-203ENST00000423275 UNC79Q9P2D8 2635 aa13.35□□□□□ -0.27
RAF1-203ENST00000423275 SLC25A20O43772 301 aa13.35□□□□□ -0.27
RAF1-203ENST00000423275 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
RAF1-203ENST00000423275 CDIP1Q9H305 208 aa13.35□□□□□ -0.27
RAF1-203ENST00000423275 IGLV5-45A0A087WSX0 123 aa13.34□□□□□ -0.27
RAF1-203ENST00000423275 K7EQD1 137 aa13.34□□□□□ -0.27
RAF1-203ENST00000423275 TRIAP1O43715 76 aa13.34□□□□□ -0.27
RAF1-203ENST00000423275 RPL35AP18077 110 aaKnown RBP13.34□□□□□ -0.27
RAF1-203ENST00000423275 TIRAPP58753 221 aa13.34□□□□□ -0.27
RAF1-203ENST00000423275 SMR3AQ99954 134 aa13.34□□□□□ -0.27
RAF1-203ENST00000423275 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
RAF1-203ENST00000423275 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
RAF1-203ENST00000423275 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
RAF1-203ENST00000423275 LINC00242Q5T6M2 205 aa13.33□□□□□ -0.28
RAF1-203ENST00000423275 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
RAF1-203ENST00000423275 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
RAF1-203ENST00000423275 GAGE12JA6NER3 117 aa13.32□□□□□ -0.28
RAF1-203ENST00000423275 GAGE4Q13068 117 aa13.32□□□□□ -0.28
RAF1-203ENST00000423275 GAGE5Q13069 117 aa13.32□□□□□ -0.28
RAF1-203ENST00000423275 PLAC8L1A1L4L8 177 aa13.31□□□□□ -0.28
RAF1-203ENST00000423275 TRBV30A0A0K0K1B3 111 aa13.31□□□□□ -0.28
RAF1-203ENST00000423275 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
RAF1-203ENST00000423275 TRAV4A0A0B4J268 109 aa13.3□□□□□ -0.28
RAF1-203ENST00000423275 NDUFA1O15239 70 aa13.3□□□□□ -0.28
RAF1-203ENST00000423275 SCGB1A1P11684 91 aa13.3□□□□□ -0.28
RAF1-203ENST00000423275 TRBV10-1A0A0K0K1A3 114 aa13.3□□□□□ -0.28
RAF1-203ENST00000423275 HILS1P60008 231 aa13.29□□□□□ -0.28
RAF1-203ENST00000423275 HERVK_113P63121 156 aa13.29□□□□□ -0.28
RAF1-203ENST00000423275 ATXN8Q156A1 80 aa13.29□□□□□ -0.28
RAF1-203ENST00000423275 ICOSQ9Y6W8 199 aa13.29□□□□□ -0.28
RAF1-203ENST00000423275 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
RAF1-203ENST00000423275 LINC01620Q4KN68 170 aa13.29□□□□□ -0.28
RAF1-203ENST00000423275 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
RAF1-203ENST00000423275 ZNF625Q96I27 306 aaPredicted RBP13.29□□□□□ -0.28
RAF1-203ENST00000423275 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
RAF1-203ENST00000423275 IGLV5-39A0A0G2JS06 123 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 Q9H8V8 135 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 TIMM17BO60830 172 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 GAGE7O76087 117 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
RAF1-203ENST00000423275 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.29
RAF1-203ENST00000423275 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.29
RAF1-203ENST00000423275 A0A0U1RRA0 63 aa13.27□□□□□ -0.29
RAF1-203ENST00000423275 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
RAF1-203ENST00000423275 KRTAP10-3P60369 221 aa13.27□□□□□ -0.29
RAF1-203ENST00000423275 CSDC2Q9Y534 153 aaKnown RBP13.27□□□□□ -0.29
RAF1-203ENST00000423275 CDC42SE2Q9NRR3 84 aa13.26□□□□□ -0.29
RAF1-203ENST00000423275 XGP55808 180 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms