RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 LIMD2Q9BT23 127 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 A0A087WYN8 130 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 A0A087WZ39 114 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 PRAC2D3DTV9 90 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 M0QY20 66 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 LY6G6DO95868 133 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 IGLV1-44P01699 117 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 DEFB114Q30KQ6 69 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 Q6ZQT0 140 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 PRR26Q8N8Z3 221 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 WFDC9Q8NEX5 89 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 SMIM11BQ8TCY0 68 aa3.65□□□□□ -1.83
SCG2-202ENST00000421386 IGHV3-64DA0A0J9YX35 117 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 A8MUN3 132 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 BPY2O14599 106 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 LECT2O14960 151 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 LY6HO94772 140 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 PROK1P58294 105 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 ELOF1P60002 83 aaKnown RBP3.64□□□□□ -1.83
SCG2-202ENST00000421386 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
SCG2-202ENST00000421386 NDPQ00604 133 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 ASB16-AS1Q495Z4 193 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 SERTAD4-AS1Q5TG53 156 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 CLEC19AQ6UXS0 136 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 NKAPP1Q8N9T2 125 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 C11orf72Q8NBR9 251 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 ITLN2Q8WWU7 325 aaPredicted RBP3.64□□□□□ -1.83
SCG2-202ENST00000421386 FAM104AQ969W3 186 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 OCR1Q9BZK8 76 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 Q9H8V8 135 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 POLEQ07864 2286 aa3.64□□□□□ -1.83
SCG2-202ENST00000421386 PRRC2BQ5JSZ5 2229 aaKnown RBP3.63□□□□□ -1.83
SCG2-202ENST00000421386 A0A087WWL8 130 aa3.63□□□□□ -1.83
SCG2-202ENST00000421386 GNRH2O43555 120 aa3.63□□□□□ -1.83
SCG2-202ENST00000421386 PSCAO43653 123 aa3.63□□□□□ -1.83
SCG2-202ENST00000421386 KIAA0087Q14695 138 aa3.63□□□□□ -1.83
SCG2-202ENST00000421386 Q5VV11 94 aa3.63□□□□□ -1.83
SCG2-202ENST00000421386 COL27A1Q8IZC6 1860 aaPredicted RBP3.62□□□□□ -1.83
SCG2-202ENST00000421386 FREM1Q5H8C1 2179 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 IGLV3-9A0A075B6K5 115 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 C16orf90A8MZG2 172 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 C5orf67F2Z3F1 127 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 F5H697 171 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 NDUFB1O75438 58 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 RPL36AP83881 106 aaKnown RBP3.62□□□□□ -1.83
SCG2-202ENST00000421386 PRR9Q5T870 116 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 Q75L30 129 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 LINC00337Q8N6G1 96 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 C1orf64Q8NEQ6 169 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 NPBQ8NG41 125 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 RPL36ALQ969Q0 106 aaKnown RBP3.62□□□□□ -1.83
SCG2-202ENST00000421386 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
SCG2-202ENST00000421386 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 LOC101927531A0A1B0GV80 90 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 IGHV4-31P0DP07 118 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 GNLYP22749 145 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 IGHV1-2P23083 117 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 HAMPP81172 84 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 IGFL3Q6UXB1 125 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 Q8N814 137 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 CCL17Q92583 94 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 ZNRD1Q9P1U0 126 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 NAV3Q8IVL0 2385 aa3.61□□□□□ -1.83
SCG2-202ENST00000421386 IGHV1OR15-1A0A075B7D0 117 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 KLLNB2CW77 178 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 HCG22E2RYF7 251 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 K7EQG2 157 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 PSPHP1O15172 72 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 IGLV1-47P01700 117 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 IGHV1-8P0DP01 117 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
SCG2-202ENST00000421386 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
SCG2-202ENST00000421386 KAAG1Q9UBP8 84 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 SEC16AO15027 2179 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 ARFGEF3Q5TH69 2177 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 MALRD1Q5VYJ5 2156 aa3.6□□□□□ -1.83
SCG2-202ENST00000421386 TRBV6-4A0A1B0GX49 114 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 CLPSL1A2RUU4 121 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 IGHV4-38-2P0DP08 117 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 CCL3L1P16619 93 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 DEFB133Q30KQ1 61 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 Q9BRP9 147 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 CHCHD7Q9BUK0 85 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 RNF186Q9NXI6 227 aa3.59□□□□□ -1.83
SCG2-202ENST00000421386 BRWD1Q9NSI6 2320 aa3.59□□□□□ -1.84
SCG2-202ENST00000421386 PRR14LQ5THK1 2151 aa3.58□□□□□ -1.84
SCG2-202ENST00000421386 PINLYPA6NC86 204 aa3.58□□□□□ -1.84
SCG2-202ENST00000421386 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
SCG2-202ENST00000421386 APELAP0DMC3 54 aa3.58□□□□□ -1.84
SCG2-202ENST00000421386 PRB4P10163 310 aaPredicted RBP3.58□□□□□ -1.84
SCG2-202ENST00000421386 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms