RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 SNCGO76070 127 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 CHCHD7Q9BUK0 85 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
SEMA3B-203ENST00000419007 TMEM89A2RUT3 159 aa11.03□□□□□ -0.64
SEMA3B-203ENST00000419007 TRBV30A0A0K0K1B3 111 aa11.03□□□□□ -0.64
SEMA3B-203ENST00000419007 J3QKU1 62 aa11.03□□□□□ -0.64
SEMA3B-203ENST00000419007 MIAQ16674 131 aa11.03□□□□□ -0.64
SEMA3B-203ENST00000419007 DYNLRB2Q8TF09 96 aa11.03□□□□□ -0.64
SEMA3B-203ENST00000419007 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
SEMA3B-203ENST00000419007 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
SEMA3B-203ENST00000419007 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
SEMA3B-203ENST00000419007 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
SEMA3B-203ENST00000419007 TRAV8-4A0A0B4J246 113 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 RPL13AP40429 203 aaKnown RBP11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 UBE2WQ96B02 151 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 PLA2G2AP14555 144 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 GAGE2BQ13066 116 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 TRAV4A0A0B4J268 109 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 CRLF1O75462 422 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 KRTAP10-9P60411 292 aa11.01□□□□□ -0.65
SEMA3B-203ENST00000419007 ACANP16112 2415 aa11□□□□□ -0.65
SEMA3B-203ENST00000419007 NF1P21359 2839 aa11□□□□□ -0.65
SEMA3B-203ENST00000419007 UNC79Q9P2D8 2635 aa11□□□□□ -0.65
SEMA3B-203ENST00000419007 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
SEMA3B-203ENST00000419007 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
SEMA3B-203ENST00000419007 H7C423 109 aa10.99□□□□□ -0.65
SEMA3B-203ENST00000419007 IGHV3-53P01767 116 aa10.99□□□□□ -0.65
SEMA3B-203ENST00000419007 DSCR9P59020 149 aa10.98□□□□□ -0.65
SEMA3B-203ENST00000419007 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
SEMA3B-203ENST00000419007 NDUFA7O95182 113 aa10.98□□□□□ -0.65
SEMA3B-203ENST00000419007 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
SEMA3B-203ENST00000419007 YAE1D1Q9NRH1 226 aa10.98□□□□□ -0.65
SEMA3B-203ENST00000419007 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 Q9H8V8 135 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 COX6A2Q02221 97 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 CIRBPQ14011 172 aaKnown RBP10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 C15orf53Q8NAA6 179 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 EDA2RQ9HAV5 297 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 PEMTQ9UBM1 199 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 SS18L2Q9UHA2 77 aa10.97□□□□□ -0.65
SEMA3B-203ENST00000419007 TRGV1A0A0A0MS02 117 aa10.96□□□□□ -0.65
SEMA3B-203ENST00000419007 M0QXV9 152 aa10.96□□□□□ -0.65
SEMA3B-203ENST00000419007 INSP01308 110 aa10.96□□□□□ -0.65
SEMA3B-203ENST00000419007 Q6YL49 198 aa10.96□□□□□ -0.65
SEMA3B-203ENST00000419007 TTC32Q5I0X7 151 aa10.96□□□□□ -0.66
SEMA3B-203ENST00000419007 RNF152Q8N8N0 203 aa10.96□□□□□ -0.66
SEMA3B-203ENST00000419007 NIPBLQ6KC79 2804 aaeCLIP10.96□□□□□ -0.66
SEMA3B-203ENST00000419007 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.66
SEMA3B-203ENST00000419007 J3QLI3 93 aa10.94□□□□□ -0.66
SEMA3B-203ENST00000419007 LINC00694P0DN24 101 aa10.94□□□□□ -0.66
SEMA3B-203ENST00000419007 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
SEMA3B-203ENST00000419007 A0A1W2PRX2 142 aa10.93□□□□□ -0.66
SEMA3B-203ENST00000419007 LST1O00453 97 aa10.93□□□□□ -0.66
SEMA3B-203ENST00000419007 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
SEMA3B-203ENST00000419007 ITPR3Q14573 2671 aa10.93□□□□□ -0.66
SEMA3B-203ENST00000419007 B5MCH6 92 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 NDUFA1O15239 70 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 IFITM1P13164 125 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 H3BT86 120 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 NDUFV3P56181 108 aaKnown RBP10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 LINC00242Q5T6M2 205 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 STHQ8IWL8 128 aa10.92□□□□□ -0.66
SEMA3B-203ENST00000419007 HERV-K104P63124 156 aa10.91□□□□□ -0.66
SEMA3B-203ENST00000419007 DEFB114Q30KQ6 69 aa10.91□□□□□ -0.66
SEMA3B-203ENST00000419007 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
SEMA3B-203ENST00000419007 RS1O15537 224 aa10.91□□□□□ -0.66
SEMA3B-203ENST00000419007 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
SEMA3B-203ENST00000419007 FLNAP21333 2647 aaKnown RBP10.91□□□□□ -0.66
SEMA3B-203ENST00000419007 A0A096LNT2 108 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 TIRAPP58753 221 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 HERVK_113P63121 156 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 MTORP42345 2549 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 GAGE4Q13068 117 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 GAGE5Q13069 117 aa10.9□□□□□ -0.66
SEMA3B-203ENST00000419007 A8MTW9 85 aa10.9□□□□□ -0.67
SEMA3B-203ENST00000419007 PIK3CD-AS1Q5SR53 167 aa10.9□□□□□ -0.67
SEMA3B-203ENST00000419007 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 NHLRC4P0CG21 123 aaPredicted RBP10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 IGHV4-31P0DP07 118 aa10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 BEAN1Q3B7T3 259 aa10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 Q6ZTI0 123 aa10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 TIMM17BO60830 172 aa10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 GAGE6Q13070 117 aa10.89□□□□□ -0.67
SEMA3B-203ENST00000419007 C4orf3Q8WVX3 66 aa10.88□□□□□ -0.67
SEMA3B-203ENST00000419007 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
SEMA3B-203ENST00000419007 Q8N2B8 174 aa10.87□□□□□ -0.67
SEMA3B-203ENST00000419007 SMIM1B2RUZ4 78 aa10.87□□□□□ -0.67
SEMA3B-203ENST00000419007 FN1P02751 2386 aaKnown RBP10.87□□□□□ -0.67
SEMA3B-203ENST00000419007 IGLV5-45A0A087WSX0 123 aa10.87□□□□□ -0.67
SEMA3B-203ENST00000419007 SOSTDC1Q6X4U4 206 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms