RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PDZD11Q5EBL8 140 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 DGAT2L7PQ6IED9 249 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 BAGE3Q86Y29 109 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 GATD1Q8NB37 220 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 OR2D3Q8NGH3 330 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 PTH2Q96A98 100 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
LINC01238-201ENST00000416204 BORCS7Q96B45 105 aa5.9□□□□□ -1.46
LINC01238-201ENST00000416204 CHCHD5Q9BSY4 110 aa5.9□□□□□ -1.46
LINC01238-201ENST00000416204 MUC21A0A0G2JKD1 596 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 A0A1B0GUT8 65 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 PCP4L1A6NKN8 68 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 M0R381 172 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 UBE2D3P61077 147 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 UBE2D2P62837 147 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 CIRBPQ14011 172 aaKnown RBP5.89□□□□□ -1.47
LINC01238-201ENST00000416204 IQCJQ1A5X6 159 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 LINC00269Q8N2A0 174 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 SPACA4Q8TDM5 124 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 PGLYRP4Q96LB8 373 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 CHCHD7Q9BUK0 85 aa5.89□□□□□ -1.47
LINC01238-201ENST00000416204 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 TMSB15BA0A087X1C1 80 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 TRBV6-8A0A0A6YYG3 113 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 A0A0J9YXV3 536 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 FABP5P3A8MUU1 101 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 SH2D1AO60880 128 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 SERF1AO75920 110 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 SLPIP03973 132 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 ARMS2P0C7Q2 107 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 GZMBP10144 247 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 CRIP1P50238 77 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 PRR3P79522 188 aaKnown RBP5.88□□□□□ -1.47
LINC01238-201ENST00000416204 RPL36AP83881 106 aaKnown RBP5.88□□□□□ -1.47
LINC01238-201ENST00000416204 GAGE6Q13070 117 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 KRTAP26-1Q6PEX3 210 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 C7orf33Q8WU49 177 aa5.88□□□□□ -1.47
LINC01238-201ENST00000416204 RPL36ALQ969Q0 106 aaKnown RBP5.88□□□□□ -1.47
LINC01238-201ENST00000416204 ALKBH7Q9BT30 221 aaPredicted RBP5.88□□□□□ -1.47
LINC01238-201ENST00000416204 IGKV2-24A0A0C4DH68 120 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 RHODO00212 210 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 RAB4AP20338 218 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 CAMPP49913 170 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 LINC00310P59036 64 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 PKIAP61925 76 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 MIAQ16674 131 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 C18orf32Q8TCD1 76 aa5.87□□□□□ -1.47
LINC01238-201ENST00000416204 TRBV7-3A0A075B6L6 115 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 F2Z2F3 143 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 TSTD3H0UI37 97 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 NUPR1O60356 82 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 PMCHP20382 165 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 CNBPP62633 177 aaKnown RBP5.86□□□□□ -1.47
LINC01238-201ENST00000416204 RBX1P62877 108 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 MAJINQ3KP22 176 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 LINC01559Q495D7 138 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 CHCHD1Q96BP2 118 aaKnown RBP5.86□□□□□ -1.47
LINC01238-201ENST00000416204 PLAC8Q9NZF1 115 aa5.86□□□□□ -1.47
LINC01238-201ENST00000416204 CTRLP40313 264 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 AMTP48728 403 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 COX6A2Q02221 97 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 ZNF56Q15929 161 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 NEXN-AS1Q8NBZ9 246 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 CNFNQ9BYD5 112 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 PHLDA3Q9Y5J5 127 aa5.85□□□□□ -1.47
LINC01238-201ENST00000416204 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 MUC21A0A140T8X8 626 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 HSBP1O75506 76 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 SCGB1D1O95968 90 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 IGLC6P0CF74 106 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 SSTP61278 116 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 PIK3CD-AS1Q5SR53 167 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 LYZL1Q6UWQ5 148 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 STPG4Q8N801 248 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 RNF185Q96GF1 192 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 SSBP4Q9BWG4 385 aaPredicted RBP5.84□□□□□ -1.47
LINC01238-201ENST00000416204 AP5S1Q9NUS5 200 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 PRR34Q9NV39 138 aa5.84□□□□□ -1.47
LINC01238-201ENST00000416204 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
LINC01238-201ENST00000416204 OR5AL1P0C617 328 aa5.83□□□□□ -1.48
LINC01238-201ENST00000416204 REG3AQ06141 175 aa5.83□□□□□ -1.48
LINC01238-201ENST00000416204 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
LINC01238-201ENST00000416204 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.82□□□□□ -1.48
LINC01238-201ENST00000416204 PPBPP02775 128 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 LINC00614P0C842 121 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 CACNG7P62955 275 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 FAM104BQ5XKR9 115 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 REG3GQ6UW15 175 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 TEX43Q6ZNM6 134 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 TMEM191AQ9H0A3 160 aa5.82□□□□□ -1.48
LINC01238-201ENST00000416204 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
LINC01238-201ENST00000416204 F5H697 171 aa5.81□□□□□ -1.48
LINC01238-201ENST00000416204 RNASEKQ6P5S7 137 aaKnown RBP5.81□□□□□ -1.48
LINC01238-201ENST00000416204 SPINK6Q6UWN8 80 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms