RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 EMP1P54849 157 aa9.69□□□□□ -0.86
SSR4P1-201ENST00000415143 NOP10Q9NPE3 64 aaKnown RBP9.69□□□□□ -0.86
SSR4P1-201ENST00000415143 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
SSR4P1-201ENST00000415143 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 H7C423 109 aa9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 K7EP34 96 aa9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 C12orf74Q32Q52 190 aa9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 Q6ZTI0 123 aa9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 GTSF1LQ9H1H1 148 aa9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 CSDC2Q9Y534 153 aaKnown RBP9.68□□□□□ -0.86
SSR4P1-201ENST00000415143 A0A1B0GWB2 263 aa9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 GIG44P09565 113 aaPredicted RBP9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 TIRAPP58753 221 aa9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 CSNK1G2-AS1Q8NCQ2 148 aa9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
SSR4P1-201ENST00000415143 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 A0A0J9YY99 117 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 K7EP13 123 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 UBE2D3P61077 147 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 UBE2D2P62837 147 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 LYRM7Q5U5X0 104 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 SLC25A29Q8N8R3 303 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 SPCS1Q9Y6A9 102 aa9.66□□□□□ -0.86
SSR4P1-201ENST00000415143 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 GAGE12BA1L429 117 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 UBE2L6O14933 153 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 GAGE7O76087 117 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 GAGE12FP0CL80 117 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 GAGE12GP0CL81 117 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 GAGE12IP0CL82 117 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 KRTAP10-3P60369 221 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.86
SSR4P1-201ENST00000415143 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
SSR4P1-201ENST00000415143 IGHV1-58A0A0C4DH39 117 aa9.64□□□□□ -0.87
SSR4P1-201ENST00000415143 IGLL5B9A064 214 aa9.64□□□□□ -0.87
SSR4P1-201ENST00000415143 APOC4P55056 127 aa9.64□□□□□ -0.87
SSR4P1-201ENST00000415143 HERVK_113P63121 156 aa9.64□□□□□ -0.87
SSR4P1-201ENST00000415143 TMEM243Q9BU79 118 aa9.64□□□□□ -0.87
SSR4P1-201ENST00000415143 GAGE12JA6NER3 117 aa9.63□□□□□ -0.87
SSR4P1-201ENST00000415143 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
SSR4P1-201ENST00000415143 GAGE4Q13068 117 aa9.63□□□□□ -0.87
SSR4P1-201ENST00000415143 GAGE5Q13069 117 aa9.63□□□□□ -0.87
SSR4P1-201ENST00000415143 GAGE13Q4V321 117 aa9.63□□□□□ -0.87
SSR4P1-201ENST00000415143 SORL1Q92673 2214 aa9.62□□□□□ -0.87
SSR4P1-201ENST00000415143 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
SSR4P1-201ENST00000415143 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
SSR4P1-201ENST00000415143 UBE2D1P51668 147 aa9.62□□□□□ -0.87
SSR4P1-201ENST00000415143 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
SSR4P1-201ENST00000415143 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
SSR4P1-201ENST00000415143 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
SSR4P1-201ENST00000415143 Q6ZUT4 128 aa9.61□□□□□ -0.87
SSR4P1-201ENST00000415143 K7ERJ3 54 aa9.6□□□□□ -0.87
SSR4P1-201ENST00000415143 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
SSR4P1-201ENST00000415143 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
SSR4P1-201ENST00000415143 VSIG2Q96IQ7 327 aa9.6□□□□□ -0.87
SSR4P1-201ENST00000415143 CITED1Q99966 193 aa9.6□□□□□ -0.87
SSR4P1-201ENST00000415143 IGLV5-45A0A087WSX0 123 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 CIRBPQ14011 172 aaKnown RBP9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 Q9UF83 564 aa9.59□□□□□ -0.87
SSR4P1-201ENST00000415143 K7ERU9 68 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 TIMM17BO60830 172 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 FHL2Q14192 279 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 SBSPONQ8IVN8 264 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 BIRC6Q9NR09 4857 aa9.58□□□□□ -0.88
SSR4P1-201ENST00000415143 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
SSR4P1-201ENST00000415143 F8W1H4 67 aa9.57□□□□□ -0.88
SSR4P1-201ENST00000415143 ZFAND6Q6FIF0 208 aa9.57□□□□□ -0.88
SSR4P1-201ENST00000415143 NAA38Q9BRA0 125 aaKnown RBP9.57□□□□□ -0.88
SSR4P1-201ENST00000415143 CBY1Q9Y3M2 126 aa9.57□□□□□ -0.88
SSR4P1-201ENST00000415143 IGHV3-64A0A075B6Q5 118 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 IFITM1P13164 125 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 WFDC9Q8NEX5 89 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 KRTAP17-1Q9BYP8 105 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 CDC42SE2Q9NRR3 84 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 PGPEP1Q9NXJ5 209 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
SSR4P1-201ENST00000415143 NACAE9PAV3 2078 aa9.55□□□□□ -0.88
SSR4P1-201ENST00000415143 APOMO95445 188 aa9.55□□□□□ -0.88
SSR4P1-201ENST00000415143 RNF183Q96D59 192 aa9.55□□□□□ -0.88
SSR4P1-201ENST00000415143 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
SSR4P1-201ENST00000415143 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
SSR4P1-201ENST00000415143 TRBV20-1A0A075B6N2 111 aa9.54□□□□□ -0.88
SSR4P1-201ENST00000415143 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
SSR4P1-201ENST00000415143 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
SSR4P1-201ENST00000415143 NDUFA1O15239 70 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms