RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 A0A087WX48 190 aa9.7□□□□□ -0.86
SF3B1-204ENST00000414963 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
SF3B1-204ENST00000414963 PAPPA-AS1Q5QFB9 102 aa9.7□□□□□ -0.86
SF3B1-204ENST00000414963 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
SF3B1-204ENST00000414963 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
SF3B1-204ENST00000414963 SIVA1O15304 175 aa9.69□□□□□ -0.86
SF3B1-204ENST00000414963 Q8N976 141 aa9.69□□□□□ -0.86
SF3B1-204ENST00000414963 AMELXQ99217 191 aa9.69□□□□□ -0.86
SF3B1-204ENST00000414963 OPRPNQ99935 248 aaPredicted RBP9.69□□□□□ -0.86
SF3B1-204ENST00000414963 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
SF3B1-204ENST00000414963 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
SF3B1-204ENST00000414963 K7EP13 123 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 LGALS9CQ6DKI2 356 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 Q6ZUT4 128 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 UBE2DNLQ8IWF7 75 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 BAALCQ8WXS3 180 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 VCX2Q9H322 139 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 Q9H8V8 135 aa9.68□□□□□ -0.86
SF3B1-204ENST00000414963 Q6ZN92 141 aa9.67□□□□□ -0.86
SF3B1-204ENST00000414963 Q8N3U1 123 aa9.67□□□□□ -0.86
SF3B1-204ENST00000414963 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
SF3B1-204ENST00000414963 TRAV12-1A0A0B4J245 112 aa9.66□□□□□ -0.86
SF3B1-204ENST00000414963 PRSS1P07477 247 aa9.66□□□□□ -0.86
SF3B1-204ENST00000414963 PMVKQ15126 192 aa9.66□□□□□ -0.86
SF3B1-204ENST00000414963 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
SF3B1-204ENST00000414963 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
SF3B1-204ENST00000414963 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
SF3B1-204ENST00000414963 TEX43Q6ZNM6 134 aa9.65□□□□□ -0.86
SF3B1-204ENST00000414963 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 ANGP03950 147 aaKnown RBP9.64□□□□□ -0.87
SF3B1-204ENST00000414963 IGHV3-30-3P0DP02 117 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 OR10D4PQ8NGN7 298 aa9.64□□□□□ -0.87
SF3B1-204ENST00000414963 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 CCL25O15444 150 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 KRTDAPP60985 99 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
SF3B1-204ENST00000414963 FAM19A3Q7Z5A8 133 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 C2orf88Q9BSF0 95 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
SF3B1-204ENST00000414963 IBA57-AS1B1ANH7 110 aa9.62□□□□□ -0.87
SF3B1-204ENST00000414963 UBE2D1P51668 147 aa9.62□□□□□ -0.87
SF3B1-204ENST00000414963 REG3AQ06141 175 aa9.62□□□□□ -0.87
SF3B1-204ENST00000414963 ODF1Q14990 250 aa9.62□□□□□ -0.87
SF3B1-204ENST00000414963 ZC2HC1BQ5TFG8 222 aa9.62□□□□□ -0.87
SF3B1-204ENST00000414963 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
SF3B1-204ENST00000414963 LOC105371267A0A1B0GV96 52 aa9.61□□□□□ -0.87
SF3B1-204ENST00000414963 LINC01545Q5VT33 79 aa9.61□□□□□ -0.87
SF3B1-204ENST00000414963 LINC00476Q8WZB0 136 aa9.61□□□□□ -0.87
SF3B1-204ENST00000414963 LINC00959A0A1B0GUT2 108 aa9.6□□□□□ -0.87
SF3B1-204ENST00000414963 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
SF3B1-204ENST00000414963 IGLV4-69A0A075B6H9 119 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 TRAV8-4A0A0B4J246 113 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 F8VRH5 84 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 H0Y8G0 127 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 SEC11AP67812 179 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 MIAQ16674 131 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 TTC32Q5I0X7 151 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
SF3B1-204ENST00000414963 DNAH1Q9P2D7 4330 aa9.59□□□□□ -0.87
SF3B1-204ENST00000414963 TRAV8-3A0A0A6YYJ7 113 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 TRAV13-1A0A0B4J241 112 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 TINCRA0A1B0GVN0 87 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 C20orf202A1L168 122 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 CRPP02741 224 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 IGLC3P0DOY3 106 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 AKR1D1P51857 326 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 SS18Q15532 418 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
SF3B1-204ENST00000414963 A0A0J9YXV3 536 aa9.57□□□□□ -0.88
SF3B1-204ENST00000414963 PLNP26678 52 aa9.57□□□□□ -0.88
SF3B1-204ENST00000414963 JOSD1Q15040 202 aaPredicted RBP9.57□□□□□ -0.88
SF3B1-204ENST00000414963 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
SF3B1-204ENST00000414963 KRTAP1-5Q9BYS1 174 aa9.57□□□□□ -0.88
SF3B1-204ENST00000414963 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
SF3B1-204ENST00000414963 DPM2O94777 84 aa9.56□□□□□ -0.88
SF3B1-204ENST00000414963 LY6G6CO95867 125 aa9.56□□□□□ -0.88
SF3B1-204ENST00000414963 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 IGLV5-45A0A087WSX0 123 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 HERVK_113P63121 156 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 COX6A2Q02221 97 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 Q6ZR54 194 aa9.55□□□□□ -0.88
SF3B1-204ENST00000414963 CHCHD10Q8WYQ3 142 aaPredicted RBP9.55□□□□□ -0.88
SF3B1-204ENST00000414963 IGHV3OR16-9A0A0B4J2B5 98 aa9.54□□□□□ -0.88
SF3B1-204ENST00000414963 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
SF3B1-204ENST00000414963 SCGB1D1O95968 90 aa9.54□□□□□ -0.88
SF3B1-204ENST00000414963 IGKCP01834 107 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms