RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 ANKRD29Q8N6D5 301 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 CHCHD10Q8WYQ3 142 aaPredicted RBP8.8□□□□□ -1
PTPRF-205ENST00000414879 CHD8Q9HCK8 2581 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 NRACQ8N912 160 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 PRRC2AP48634 2157 aaKnown RBP8.8□□□□□ -1
PTPRF-205ENST00000414879 CRYGDP07320 174 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 WNK1Q9H4A3 2382 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 ODF3L2Q3SX64 289 aa8.8□□□□□ -1
PTPRF-205ENST00000414879 TMEM223A0PJW6 202 aa8.79□□□□□ -1
PTPRF-205ENST00000414879 PLXNB1O43157 2135 aa8.79□□□□□ -1
PTPRF-205ENST00000414879 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
PTPRF-205ENST00000414879 RAI1Q7Z5J4 1906 aaPredicted RBP8.79□□□□□ -1
PTPRF-205ENST00000414879 LINC00482Q8N8I6 264 aa8.79□□□□□ -1
PTPRF-205ENST00000414879 BBC3Q96PG8 261 aaPredicted RBP8.79□□□□□ -1
PTPRF-205ENST00000414879 LINC01620Q4KN68 170 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 P0DMU3 169 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 FAM231AP0DMU4 169 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 FAM231CP0DMU5 169 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 PRR9Q5T870 116 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 C18orf65Q6ZTR6 163 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 NTN5Q8WTR8 489 aaPredicted RBP8.78□□□□□ -1
PTPRF-205ENST00000414879 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 CEP295Q9C0D2 2601 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 FXYD2P54710 66 aa8.78□□□□□ -1
PTPRF-205ENST00000414879 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
PTPRF-205ENST00000414879 RNF183Q96D59 192 aa8.77□□□□□ -1.01
PTPRF-205ENST00000414879 TSHBP01222 138 aa8.77□□□□□ -1.01
PTPRF-205ENST00000414879 TMEM256-PLSCR3K7ERE1 68 aa8.77□□□□□ -1.01
PTPRF-205ENST00000414879 HIST2H2BDQ6DRA6 164 aa8.76□□□□□ -1.01
PTPRF-205ENST00000414879 UBE2D3P61077 147 aa8.76□□□□□ -1.01
PTPRF-205ENST00000414879 UBE2D2P62837 147 aa8.76□□□□□ -1.01
PTPRF-205ENST00000414879 HAMPP81172 84 aa8.76□□□□□ -1.01
PTPRF-205ENST00000414879 CDKN2A-AS1Q9UH64 79 aa8.76□□□□□ -1.01
PTPRF-205ENST00000414879 TEN1Q86WV5 123 aa8.76□□□□□ -1.01
PTPRF-205ENST00000414879 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
PTPRF-205ENST00000414879 UBE2AP49459 152 aa8.75□□□□□ -1.01
PTPRF-205ENST00000414879 RBX1P62877 108 aa8.75□□□□□ -1.01
PTPRF-205ENST00000414879 PTPRBP23467 1997 aa8.75□□□□□ -1.01
PTPRF-205ENST00000414879 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
PTPRF-205ENST00000414879 COX7BP24311 80 aa8.74□□□□□ -1.01
PTPRF-205ENST00000414879 KPRPQ5T749 579 aaPredicted RBP8.74□□□□□ -1.01
PTPRF-205ENST00000414879 CEMP1Q6PRD7 247 aaPredicted RBP8.74□□□□□ -1.01
PTPRF-205ENST00000414879 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
PTPRF-205ENST00000414879 TANC2Q9HCD6 1990 aa8.74□□□□□ -1.01
PTPRF-205ENST00000414879 PROK1P58294 105 aa8.74□□□□□ -1.01
PTPRF-205ENST00000414879 CDPF1Q6NVV7 123 aa8.74□□□□□ -1.01
PTPRF-205ENST00000414879 MYO9AB2RTY4 2548 aa8.74□□□□□ -1.01
PTPRF-205ENST00000414879 MYO18BQ8IUG5 2567 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 BEAN1Q3B7T3 259 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 UBE2D4Q9Y2X8 147 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 COX17Q14061 63 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 KLK9Q2XQG4 91 aa8.73□□□□□ -1.01
PTPRF-205ENST00000414879 ARHGAP32A7KAX9 2087 aa8.72□□□□□ -1.01
PTPRF-205ENST00000414879 F8WDY8 70 aa8.72□□□□□ -1.01
PTPRF-205ENST00000414879 TAX1BP3O14907 124 aa8.72□□□□□ -1.01
PTPRF-205ENST00000414879 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
PTPRF-205ENST00000414879 NDUFB1O75438 58 aa8.71□□□□□ -1.01
PTPRF-205ENST00000414879 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.01
PTPRF-205ENST00000414879 TTTY13Q9BZ97 58 aa8.71□□□□□ -1.02
PTPRF-205ENST00000414879 NUPR2A6NF83 97 aa8.7□□□□□ -1.02
PTPRF-205ENST00000414879 NCR3O14931 201 aa8.7□□□□□ -1.02
PTPRF-205ENST00000414879 LECT2O14960 151 aa8.7□□□□□ -1.02
PTPRF-205ENST00000414879 DAND5Q8N907 189 aa8.7□□□□□ -1.02
PTPRF-205ENST00000414879 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
PTPRF-205ENST00000414879 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
PTPRF-205ENST00000414879 RBM3P98179 157 aaKnown RBP8.69□□□□□ -1.02
PTPRF-205ENST00000414879 SMR3AQ99954 134 aa8.69□□□□□ -1.02
PTPRF-205ENST00000414879 IGLV4-69A0A075B6H9 119 aa8.69□□□□□ -1.02
PTPRF-205ENST00000414879 UBE2D1P51668 147 aa8.69□□□□□ -1.02
PTPRF-205ENST00000414879 DEFB105AQ8NG35 78 aa8.69□□□□□ -1.02
PTPRF-205ENST00000414879 Q8IZM0 81 aa8.68□□□□□ -1.02
PTPRF-205ENST00000414879 TRACP01848 142 aa8.68□□□□□ -1.02
PTPRF-205ENST00000414879 RNASE8Q8TDE3 154 aaKnown RBP8.68□□□□□ -1.02
PTPRF-205ENST00000414879 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
PTPRF-205ENST00000414879 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
PTPRF-205ENST00000414879 WFDC10AQ9H1F0 79 aa8.68□□□□□ -1.02
PTPRF-205ENST00000414879 TNRC18O15417 2968 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-205ENST00000414879 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
PTPRF-205ENST00000414879 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
PTPRF-205ENST00000414879 IGIPA6NJ69 53 aa8.67□□□□□ -1.02
PTPRF-205ENST00000414879 LINC00474Q9P2X8 69 aa8.67□□□□□ -1.02
PTPRF-205ENST00000414879 hADV29S1A0JD25 119 aa8.67□□□□□ -1.02
PTPRF-205ENST00000414879 NREPQ16612 68 aa8.67□□□□□ -1.02
PTPRF-205ENST00000414879 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
PTPRF-205ENST00000414879 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
PTPRF-205ENST00000414879 NHLRC4P0CG21 123 aaPredicted RBP8.66□□□□□ -1.02
PTPRF-205ENST00000414879 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
PTPRF-205ENST00000414879 SMIM20Q8N5G0 67 aa8.66□□□□□ -1.02
PTPRF-205ENST00000414879 FSHBP01225 129 aa8.66□□□□□ -1.02
PTPRF-205ENST00000414879 A0A1B0GX51 115 aa8.65□□□□□ -1.02
PTPRF-205ENST00000414879 Q8N976 141 aa8.65□□□□□ -1.02
PTPRF-205ENST00000414879 SPTBN4Q9H254 2564 aa8.65□□□□□ -1.02
PTPRF-205ENST00000414879 SORL1Q92673 2214 aa8.65□□□□□ -1.03
PTPRF-205ENST00000414879 FHL3Q13643 280 aa8.65□□□□□ -1.03
PTPRF-205ENST00000414879 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
PTPRF-205ENST00000414879 ABCA2Q9BZC7 2435 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms