RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 TMEM141Q96I45 108 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 PMCHL2Q9BQD1 86 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 MAP1LC3CQ9BXW4 147 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 PRSS1P07477 247 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 Q6ZN92 141 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 OR5A1Q8NGJ0 315 aa6.6□□□□□ -1.35
RIF1-202ENST00000414861 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
RIF1-202ENST00000414861 TRAV8-6A0A0B4J262 113 aa6.59□□□□□ -1.35
RIF1-202ENST00000414861 ZNF25P17030 456 aaPredicted RBP6.59□□□□□ -1.35
RIF1-202ENST00000414861 CCL18P55774 89 aa6.59□□□□□ -1.35
RIF1-202ENST00000414861 DGAT2L7PQ6IED9 249 aa6.59□□□□□ -1.35
RIF1-202ENST00000414861 CDC42SE2Q9NRR3 84 aa6.59□□□□□ -1.35
RIF1-202ENST00000414861 MRPS16Q9Y3D3 137 aaKnown RBP6.59□□□□□ -1.35
RIF1-202ENST00000414861 DNAH1Q9P2D7 4330 aa6.59□□□□□ -1.35
RIF1-202ENST00000414861 MRPS36P82909 103 aaKnown RBP6.59□□□□□ -1.35
RIF1-202ENST00000414861 AMELXQ99217 191 aa6.59□□□□□ -1.35
RIF1-202ENST00000414861 A0A087WX48 190 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 A0A1B0GUV1 79 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 PRSS29PA6NIE9 313 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 IGHV3-30P01768 117 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 IGHV3-33P01772 117 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 IGHV3-30-3P0DP02 117 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 IGHV3-30-5P0DP03 117 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 ODF1Q14990 250 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 PYY3Q5JQD4 70 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 ZNF664Q8N3J9 261 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 CLPSL2Q6UWE3 100 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
RIF1-202ENST00000414861 NPSP0C0P6 89 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 PMVKQ15126 192 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 VCX2Q9H322 139 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 IGKV3OR2-268A0A0C4DH90 116 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 SMAGPQ0VAQ4 97 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
RIF1-202ENST00000414861 MRPL35Q9NZE8 188 aaKnown RBP6.57□□□□□ -1.36
RIF1-202ENST00000414861 IGLV4-69A0A075B6H9 119 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 ANGP03950 147 aaKnown RBP6.56□□□□□ -1.36
RIF1-202ENST00000414861 TCTAP57738 103 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 JOSD1Q15040 202 aaPredicted RBP6.56□□□□□ -1.36
RIF1-202ENST00000414861 LINC01556Q5JQF7 62 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 SCGB1D1O95968 90 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 LGALS9CQ6DKI2 356 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 UBE2DNLQ8IWF7 75 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 ATOH7Q8N100 152 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 LINC00269Q8N2A0 174 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 KMT2AQ03164 3969 aa6.56□□□□□ -1.36
RIF1-202ENST00000414861 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 SIVA1O15304 175 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 DNAH10OSP0CZ25 163 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 PKIAP61925 76 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
RIF1-202ENST00000414861 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 F8VRH5 84 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 UBE2D1P51668 147 aa6.55□□□□□ -1.36
RIF1-202ENST00000414861 C11orf86A6NJI1 115 aa6.54□□□□□ -1.36
RIF1-202ENST00000414861 REG3AQ06141 175 aa6.54□□□□□ -1.36
RIF1-202ENST00000414861 C2orf88Q9BSF0 95 aa6.54□□□□□ -1.36
RIF1-202ENST00000414861 Q9H8V8 135 aa6.54□□□□□ -1.36
RIF1-202ENST00000414861 C20orf202A1L168 122 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 ENHOQ6UWT2 76 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 COX6A2Q02221 97 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 MAJINQ3KP22 176 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
RIF1-202ENST00000414861 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 C3orf84H3BNL1 204 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 DPM2O94777 84 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 IGKCP01834 107 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 UBE2WQ96B02 151 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 SMIM6P0DI80 62 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 NFE4Q86UQ8 179 aa6.52□□□□□ -1.37
RIF1-202ENST00000414861 hDV102S1A0JD36 115 aa6.51□□□□□ -1.37
RIF1-202ENST00000414861 PLNP26678 52 aa6.51□□□□□ -1.37
RIF1-202ENST00000414861 TINCRA0A1B0GVN0 87 aa6.51□□□□□ -1.37
RIF1-202ENST00000414861 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
RIF1-202ENST00000414861 FAM19A3Q7Z5A8 133 aa6.51□□□□□ -1.37
RIF1-202ENST00000414861 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
RIF1-202ENST00000414861 DNAH10Q8IVF4 4471 aa6.51□□□□□ -1.37
RIF1-202ENST00000414861 CCL25O15444 150 aa6.5□□□□□ -1.37
RIF1-202ENST00000414861 CRPP02741 224 aa6.5□□□□□ -1.37
RIF1-202ENST00000414861 XCL1P47992 114 aa6.5□□□□□ -1.37
RIF1-202ENST00000414861 STPG4Q8N801 248 aa6.5□□□□□ -1.37
RIF1-202ENST00000414861 CDKN2A-AS1Q9UH64 79 aa6.5□□□□□ -1.37
RIF1-202ENST00000414861 TMEM170BQ5T4T1 132 aa6.5□□□□□ -1.37
RIF1-202ENST00000414861 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms