RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 NDUFA4L2Q9NRX3 87 aa0.32□□□□□ -2.36
ATG4C-204ENST00000414558 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
ATG4C-204ENST00000414558 FRAS1Q86XX4 4008 aa0.32□□□□□ -2.36
ATG4C-204ENST00000414558 SHANK2Q9UPX8 1470 aa0.32□□□□□ -2.36
ATG4C-204ENST00000414558 JMJD1CQ15652 2540 aa0.32□□□□□ -2.36
ATG4C-204ENST00000414558 EHBP1L1Q8N3D4 1523 aa0.32□□□□□ -2.36
ATG4C-204ENST00000414558 BTAF1O14981 1849 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 ZNF236Q9UL36 1845 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 TRAV30A0A087WSZ9 112 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 UQCR11O14957 56 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 APOC3P02656 99 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 COX6CP09669 75 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 SPINK7P58062 85 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 KRTDAPP60985 99 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 GNG11P61952 73 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 CFAP126Q5VTH2 177 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 ACBD7Q8N6N7 88 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 SMR3AQ99954 134 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 FAM103A1Q9BTL3 118 aaKnown RBP0.31□□□□□ -2.36
ATG4C-204ENST00000414558 UQCR10Q9UDW1 63 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 ZMYM4Q5VZL5 1548 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 MEGF8Q7Z7M0 2845 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 PDCD11Q14690 1871 aaKnown RBP0.31□□□□□ -2.36
ATG4C-204ENST00000414558 CCNB3Q8WWL7 1395 aa0.31□□□□□ -2.36
ATG4C-204ENST00000414558 CLTCQ00610 1675 aaKnown RBP0.3□□□□□ -2.36
ATG4C-204ENST00000414558 TROQ12816 1431 aaPredicted RBP0.3□□□□□ -2.36
ATG4C-204ENST00000414558 NSD3Q9BZ95 1437 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 TEX14Q8IWB6 1497 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 CTXND1A0A1B0GTU2 59 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 G3V318 75 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 M0R135 149 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 HMGN4O00479 90 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 S100A8P05109 93 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 NMBP08949 121 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 UBE2D3P61077 147 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 UBE2D2P62837 147 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 TMEM170BQ5T4T1 132 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 TSLPQ969D9 159 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 CDC42SE2Q9NRR3 84 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 LINC00474Q9P2X8 69 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 AP4S1Q9Y587 144 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 TTC37Q6PGP7 1564 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 CADP27708 2225 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 CACNA1CQ13936 2221 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 ZFHX3Q15911 3703 aa0.3□□□□□ -2.36
ATG4C-204ENST00000414558 MAGI1Q96QZ7 1491 aaPredicted RBP0.29□□□□□ -2.36
ATG4C-204ENST00000414558 PRDM15P57071 1507 aaPredicted RBP0.29□□□□□ -2.36
ATG4C-204ENST00000414558 HMGXB3Q12766 1538 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 MYO7AQ13402 2215 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 LRP6O75581 1613 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 CRYM-AS1A6NIL9 109 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 F8VRH5 84 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 CHKB-CPT1BH3BT56 60 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 NDUFC1O43677 76 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 SFT2D2O95562 160 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 MGPP08493 103 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 Q0VG73 95 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 BAGE2Q86Y30 109 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 UBE2DNLQ8IWF7 75 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 FAIMQ9NVQ4 179 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 PRO1854Q9UHT4 67 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 RGPD4Q7Z3J3 1758 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 ABCC5O15440 1437 aa0.29□□□□□ -2.36
ATG4C-204ENST00000414558 ARHGEF12Q9NZN5 1544 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 COL4A6Q14031 1691 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 SHPRHQ149N8 1683 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 XRN1Q8IZH2 1706 aaKnown RBP0.28□□□□□ -2.36
ATG4C-204ENST00000414558 MARF1Q9Y4F3 1742 aaKnown RBP0.28□□□□□ -2.36
ATG4C-204ENST00000414558 TRAV22A0A0B4J277 110 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 IGLC7A0M8Q6 106 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 M0R143 59 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 LINC00032P0C843 101 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 TRAPPC2P0DI81 140 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 TRAPPC2BP0DI82 140 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 SNCAP37840 140 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 S100A10P60903 97 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 COX6A2Q02221 97 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 FAM213BQ8TBF2 198 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 NPVFQ9HCQ7 196 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 NXT2Q9NPJ8 142 aaKnown RBP0.28□□□□□ -2.36
ATG4C-204ENST00000414558 MANBALQ9NQG1 85 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
ATG4C-204ENST00000414558 FANCAO15360 1455 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 ABCC10Q5T3U5 1492 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 MLH3Q9UHC1 1453 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 MYO7BQ6PIF6 2116 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 ABCC2Q92887 1545 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 SMARCA2P51531 1590 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 ERCC6L2Q5T890 1561 aa0.28□□□□□ -2.37
ATG4C-204ENST00000414558 BAZ1AQ9NRL2 1556 aaPredicted RBP0.28□□□□□ -2.37
ATG4C-204ENST00000414558 BIVM-ERCC5R4GMW8 1640 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 CACNA1HO95180 2353 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 KIAA1551Q9HCM1 1747 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 FAM208BQ5VWN6 2430 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 RGPD3A6NKT7 1758 aaPredicted RBP0.27□□□□□ -2.37
ATG4C-204ENST00000414558 A0A0D9SFI3 127 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 hADV29S1A0JD25 119 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 ATOX1O00244 68 aa0.27□□□□□ -2.37
ATG4C-204ENST00000414558 SAA2P0DJI9 122 aaPredicted RBP0.27□□□□□ -2.37
ATG4C-204ENST00000414558 S100A3P33764 101 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms