RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 C2orf82Q6UX34 121 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 DAND5Q8N907 189 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 UBE2WQ96B02 151 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 FBN2P35556 2912 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 TEX49A0A1B0GTD5 131 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 HERVK_113P63121 156 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 STHQ8IWL8 128 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 POLQO75417 2590 aa13.67□□□□□ -0.22
TNFRSF8-202ENST00000413146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF8-202ENST00000413146 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
TNFRSF8-202ENST00000413146 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
TNFRSF8-202ENST00000413146 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
TNFRSF8-202ENST00000413146 COX6A2Q02221 97 aa13.66□□□□□ -0.22
TNFRSF8-202ENST00000413146 CLEC2BQ92478 149 aa13.66□□□□□ -0.22
TNFRSF8-202ENST00000413146 H3BT86 120 aa13.66□□□□□ -0.22
TNFRSF8-202ENST00000413146 H7C423 109 aa13.66□□□□□ -0.22
TNFRSF8-202ENST00000413146 TRAV8-4A0A0B4J246 113 aa13.65□□□□□ -0.22
TNFRSF8-202ENST00000413146 TEX29Q8N6K0 151 aa13.65□□□□□ -0.22
TNFRSF8-202ENST00000413146 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
TNFRSF8-202ENST00000413146 Q9H8V8 135 aa13.65□□□□□ -0.22
TNFRSF8-202ENST00000413146 LST1O00453 97 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 RPL36AP83881 106 aaKnown RBP13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 C1orf158Q8N1D5 194 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 RPL36ALQ969Q0 106 aaKnown RBP13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 CITED1Q99966 193 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 IGLV5-39A0A0G2JS06 123 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 SNCGO76070 127 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 DEFB113Q30KQ7 82 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
TNFRSF8-202ENST00000413146 TRAV25A0A0B4J276 109 aa13.63□□□□□ -0.23
TNFRSF8-202ENST00000413146 K7EQD1 137 aa13.63□□□□□ -0.23
TNFRSF8-202ENST00000413146 LINC00694P0DN24 101 aa13.63□□□□□ -0.23
TNFRSF8-202ENST00000413146 KRTAP10-9P60411 292 aa13.63□□□□□ -0.23
TNFRSF8-202ENST00000413146 TRAV26-1A0A087WT03 109 aa13.62□□□□□ -0.23
TNFRSF8-202ENST00000413146 TRBV10-1A0A0K0K1A3 114 aa13.62□□□□□ -0.23
TNFRSF8-202ENST00000413146 LINC00308Q8TCZ7 52 aa13.62□□□□□ -0.23
TNFRSF8-202ENST00000413146 Q96MF0 132 aa13.62□□□□□ -0.23
TNFRSF8-202ENST00000413146 ZNF625Q96I27 306 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 UBR5O95071 2799 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 TRAV13-1A0A0B4J241 112 aa13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 DAZ2Q13117 558 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 DAZ4Q86SG3 579 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 ANAPC13Q9BS18 74 aa13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 DAZ3Q9NR90 486 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 CSDC2Q9Y534 153 aaKnown RBP13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
TNFRSF8-202ENST00000413146 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
TNFRSF8-202ENST00000413146 Q6ZTI0 123 aa13.6□□□□□ -0.23
TNFRSF8-202ENST00000413146 FAM19A3Q7Z5A8 133 aa13.6□□□□□ -0.23
TNFRSF8-202ENST00000413146 NDUFA7O95182 113 aa13.6□□□□□ -0.23
TNFRSF8-202ENST00000413146 COPS9Q8WXC6 57 aa13.6□□□□□ -0.23
TNFRSF8-202ENST00000413146 CITED2Q99967 270 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF8-202ENST00000413146 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 A0A1W2PRX2 142 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 GAGE2BQ13066 116 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 GAGE2EQ4V326 116 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 LRRC75A-AS1Q8N1F1 130 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 GAGE2DQ9UEU5 116 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 MYO9AB2RTY4 2548 aa13.59□□□□□ -0.23
TNFRSF8-202ENST00000413146 TRAV4A0A0B4J268 109 aa13.58□□□□□ -0.24
TNFRSF8-202ENST00000413146 PRIMA1Q86XR5 153 aa13.58□□□□□ -0.24
TNFRSF8-202ENST00000413146 TMEM86BQ8N661 226 aa13.58□□□□□ -0.24
TNFRSF8-202ENST00000413146 C11orf44Q8N8P7 122 aa13.58□□□□□ -0.24
TNFRSF8-202ENST00000413146 TEX15Q9BXT5 2789 aa13.58□□□□□ -0.24
TNFRSF8-202ENST00000413146 GAGE12JA6NER3 117 aa13.57□□□□□ -0.24
TNFRSF8-202ENST00000413146 GAGE4Q13068 117 aa13.57□□□□□ -0.24
TNFRSF8-202ENST00000413146 GAGE5Q13069 117 aa13.57□□□□□ -0.24
TNFRSF8-202ENST00000413146 MEIG1Q5JSS6 88 aa13.57□□□□□ -0.24
TNFRSF8-202ENST00000413146 CRLF1O75462 422 aa13.57□□□□□ -0.24
TNFRSF8-202ENST00000413146 CDC42SE2Q9NRR3 84 aa13.56□□□□□ -0.24
TNFRSF8-202ENST00000413146 CENPEQ02224 2701 aa13.56□□□□□ -0.24
TNFRSF8-202ENST00000413146 CCL24O00175 119 aa13.56□□□□□ -0.24
TNFRSF8-202ENST00000413146 PLA2G2AP14555 144 aa13.56□□□□□ -0.24
TNFRSF8-202ENST00000413146 UBE2L6O14933 153 aa13.55□□□□□ -0.24
TNFRSF8-202ENST00000413146 C15orf53Q8NAA6 179 aa13.54□□□□□ -0.24
TNFRSF8-202ENST00000413146 SOSTDC1Q6X4U4 206 aa13.54□□□□□ -0.24
TNFRSF8-202ENST00000413146 NOP10Q9NPE3 64 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-202ENST00000413146 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 DNAJC9-AS1A6NH13 148 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 F5H768 121 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 J3QKU1 62 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 HERV-K104P63124 156 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 NAV2Q8IVL1 2488 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 COX7A2LO14548 114 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
TNFRSF8-202ENST00000413146 WNK1Q9H4A3 2382 aa13.52□□□□□ -0.25
TNFRSF8-202ENST00000413146 LRRK2Q5S007 2527 aa13.52□□□□□ -0.25
TNFRSF8-202ENST00000413146 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.25
TNFRSF8-202ENST00000413146 Q6Q795 121 aa13.52□□□□□ -0.25
TNFRSF8-202ENST00000413146 FAM240AA0A1B0GVK7 77 aa13.51□□□□□ -0.25
TNFRSF8-202ENST00000413146 CHD6Q8TD26 2715 aa13.51□□□□□ -0.25
TNFRSF8-202ENST00000413146 TTC32Q5I0X7 151 aa13.5□□□□□ -0.25
TNFRSF8-202ENST00000413146 NDUFV3P56181 108 aaKnown RBP13.5□□□□□ -0.25
TNFRSF8-202ENST00000413146 SHISA2Q6UWI4 295 aa13.5□□□□□ -0.25
TNFRSF8-202ENST00000413146 KRTAP1-3Q8IUG1 177 aa13.5□□□□□ -0.25
TNFRSF8-202ENST00000413146 TRGV2A0A075B6R0 118 aa13.49□□□□□ -0.25
TNFRSF8-202ENST00000413146 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms