RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CRYGDP07320 174 aa13.12□□□□□ -0.31
SMPD4-202ENST00000409031 TSPEAR-AS2P59090 65 aa13.12□□□□□ -0.31
SMPD4-202ENST00000409031 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
SMPD4-202ENST00000409031 NRGNQ92686 78 aa13.12□□□□□ -0.31
SMPD4-202ENST00000409031 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
SMPD4-202ENST00000409031 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
SMPD4-202ENST00000409031 APOC4P55056 127 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 COX7BP24311 80 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 CUL9Q8IWT3 2517 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 CCL24O00175 119 aa13.11□□□□□ -0.31
SMPD4-202ENST00000409031 A6NDX4 124 aa13.1□□□□□ -0.31
SMPD4-202ENST00000409031 PRB2P02812 416 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-202ENST00000409031 MRPL55Q7Z7F7 128 aaKnown RBP13.1□□□□□ -0.31
SMPD4-202ENST00000409031 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
SMPD4-202ENST00000409031 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
SMPD4-202ENST00000409031 SMCPP49901 116 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-202ENST00000409031 UBE2D4Q9Y2X8 147 aa13.09□□□□□ -0.31
SMPD4-202ENST00000409031 CPAMD8Q8IZJ3 1885 aa13.09□□□□□ -0.31
SMPD4-202ENST00000409031 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
SMPD4-202ENST00000409031 SERP1Q9Y6X1 66 aa13.09□□□□□ -0.31
SMPD4-202ENST00000409031 Q8N6K4 173 aa13.08□□□□□ -0.32
SMPD4-202ENST00000409031 C1orf195Q5TG92 126 aa13.08□□□□□ -0.32
SMPD4-202ENST00000409031 ACACBO00763 2458 aa13.08□□□□□ -0.32
SMPD4-202ENST00000409031 SMIM11BQ8TCY0 68 aa13.07□□□□□ -0.32
SMPD4-202ENST00000409031 SNURFQ9Y675 71 aa13.07□□□□□ -0.32
SMPD4-202ENST00000409031 FAM208BQ5VWN6 2430 aa13.06□□□□□ -0.32
SMPD4-202ENST00000409031 LINC01546A6NGU7 62 aa13.06□□□□□ -0.32
SMPD4-202ENST00000409031 UBE2BP63146 152 aa13.06□□□□□ -0.32
SMPD4-202ENST00000409031 CLPSL1A2RUU4 121 aa13.05□□□□□ -0.32
SMPD4-202ENST00000409031 PROK1P58294 105 aa13.05□□□□□ -0.32
SMPD4-202ENST00000409031 MAP6D1Q9H9H5 199 aa13.05□□□□□ -0.32
SMPD4-202ENST00000409031 KLK5Q9Y337 293 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-202ENST00000409031 C6orf99Q4VX62 202 aa13.05□□□□□ -0.32
SMPD4-202ENST00000409031 TRAV7A0A075B6U4 112 aa13.05□□□□□ -0.32
SMPD4-202ENST00000409031 LOC107984640A0A0U1RRK4 108 aa13.04□□□□□ -0.32
SMPD4-202ENST00000409031 PSCAO43653 123 aa13.04□□□□□ -0.32
SMPD4-202ENST00000409031 Q6ZTI0 123 aa13.04□□□□□ -0.32
SMPD4-202ENST00000409031 TECTAO75443 2155 aa13.04□□□□□ -0.32
SMPD4-202ENST00000409031 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
SMPD4-202ENST00000409031 LMO4P61968 165 aa13.03□□□□□ -0.32
SMPD4-202ENST00000409031 RMI2Q96E14 147 aa13.03□□□□□ -0.32
SMPD4-202ENST00000409031 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
SMPD4-202ENST00000409031 CCKP06307 115 aa13.02□□□□□ -0.32
SMPD4-202ENST00000409031 IGHV4-30-2A0A087WSY4 118 aa13.02□□□□□ -0.33
SMPD4-202ENST00000409031 FAM19A3Q7Z5A8 133 aa13.02□□□□□ -0.33
SMPD4-202ENST00000409031 IGKV2D-24A0A075B6R9 120 aa13.01□□□□□ -0.33
SMPD4-202ENST00000409031 PRO0255Q9UI72 69 aa13.01□□□□□ -0.33
SMPD4-202ENST00000409031 A0A087WVE0 104 aa13.01□□□□□ -0.33
SMPD4-202ENST00000409031 ADAMTSL4-AS1Q5T5F5 129 aa13.01□□□□□ -0.33
SMPD4-202ENST00000409031 Q6ZSV7 163 aa13□□□□□ -0.33
SMPD4-202ENST00000409031 SPTSSBQ8NFR3 76 aa13□□□□□ -0.33
SMPD4-202ENST00000409031 NDUFB1O75438 58 aa13□□□□□ -0.33
SMPD4-202ENST00000409031 SBSPONQ8IVN8 264 aa12.99□□□□□ -0.33
SMPD4-202ENST00000409031 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-202ENST00000409031 ADORA2A-AS1P86434 159 aa12.98□□□□□ -0.33
SMPD4-202ENST00000409031 PTPN13Q12923 2485 aa12.97□□□□□ -0.33
SMPD4-202ENST00000409031 AMELXQ99217 191 aa12.97□□□□□ -0.33
SMPD4-202ENST00000409031 MIFP14174 115 aa12.97□□□□□ -0.33
SMPD4-202ENST00000409031 RPS28P62857 69 aaKnown RBP12.97□□□□□ -0.33
SMPD4-202ENST00000409031 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
SMPD4-202ENST00000409031 NDUFS5O43920 106 aa12.96□□□□□ -0.33
SMPD4-202ENST00000409031 CCL18P55774 89 aa12.96□□□□□ -0.33
SMPD4-202ENST00000409031 C4orf3Q8WVX3 66 aa12.96□□□□□ -0.33
SMPD4-202ENST00000409031 TRBV6-8A0A0A6YYG3 113 aa12.96□□□□□ -0.33
SMPD4-202ENST00000409031 F8W735 103 aaPredicted RBP12.96□□□□□ -0.34
SMPD4-202ENST00000409031 SPART-AS1P0CW21 52 aa12.96□□□□□ -0.34
SMPD4-202ENST00000409031 KLK12Q9UKR0 248 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 CRYGAP11844 174 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 Q6ZQY7 126 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 UBE2DNLQ8IWF7 75 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 PIEZO1Q92508 2521 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 DSCAMO60469 2012 aa12.95□□□□□ -0.34
SMPD4-202ENST00000409031 Q96MF0 132 aa12.94□□□□□ -0.34
SMPD4-202ENST00000409031 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
SMPD4-202ENST00000409031 DCANP1Q8TF63 244 aa12.94□□□□□ -0.34
SMPD4-202ENST00000409031 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
SMPD4-202ENST00000409031 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
SMPD4-202ENST00000409031 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-202ENST00000409031 ZNF580Q9UK33 172 aa12.93□□□□□ -0.34
SMPD4-202ENST00000409031 REG3AQ06141 175 aa12.93□□□□□ -0.34
SMPD4-202ENST00000409031 PRORYQ9H606 182 aa12.93□□□□□ -0.34
SMPD4-202ENST00000409031 WDR87Q6ZQQ6 2873 aa12.92□□□□□ -0.34
SMPD4-202ENST00000409031 NTM-AS1Q6ZSK4 140 aa12.92□□□□□ -0.34
SMPD4-202ENST00000409031 Q8NA96 180 aa12.92□□□□□ -0.34
SMPD4-202ENST00000409031 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
SMPD4-202ENST00000409031 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
SMPD4-202ENST00000409031 CACNA1AO00555 2505 aa12.91□□□□□ -0.34
SMPD4-202ENST00000409031 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
SMPD4-202ENST00000409031 MYO9AB2RTY4 2548 aa12.9□□□□□ -0.34
SMPD4-202ENST00000409031 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
SMPD4-202ENST00000409031 LRP4O75096 1905 aa12.9□□□□□ -0.34
SMPD4-202ENST00000409031 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
SMPD4-202ENST00000409031 TET2Q6N021 2002 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-202ENST00000409031 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
SMPD4-202ENST00000409031 PRO0628Q9UI54 55 aa12.88□□□□□ -0.35
SMPD4-202ENST00000409031 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms