RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
CCDC85A-201ENST00000407595 TRAV4A0A0B4J268 109 aa11.66□□□□□ -0.54
CCDC85A-201ENST00000407595 ZNF702PQ9H963 129 aa11.66□□□□□ -0.54
CCDC85A-201ENST00000407595 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
CCDC85A-201ENST00000407595 LINC00158P58513 81 aa11.66□□□□□ -0.54
CCDC85A-201ENST00000407595 A0A0J9YXY3 114 aa11.65□□□□□ -0.54
CCDC85A-201ENST00000407595 DEFB121Q5J5C9 76 aa11.65□□□□□ -0.54
CCDC85A-201ENST00000407595 K7EMT4 169 aa11.65□□□□□ -0.54
CCDC85A-201ENST00000407595 ZNF22P17026 224 aaPredicted RBP11.65□□□□□ -0.54
CCDC85A-201ENST00000407595 TRBV10-2A0A0K0K1G8 114 aa11.65□□□□□ -0.55
CCDC85A-201ENST00000407595 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.55
CCDC85A-201ENST00000407595 Q9H8V8 135 aa11.65□□□□□ -0.55
CCDC85A-201ENST00000407595 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
CCDC85A-201ENST00000407595 NDUFV3P56181 108 aaKnown RBP11.64□□□□□ -0.55
CCDC85A-201ENST00000407595 PSMG3-AS1Q96PY0 264 aa11.64□□□□□ -0.55
CCDC85A-201ENST00000407595 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
CCDC85A-201ENST00000407595 MED14OSP0DP75 135 aa11.64□□□□□ -0.55
CCDC85A-201ENST00000407595 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
CCDC85A-201ENST00000407595 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
CCDC85A-201ENST00000407595 EDA2RQ9HAV5 297 aa11.63□□□□□ -0.55
CCDC85A-201ENST00000407595 TRIAP1O43715 76 aa11.63□□□□□ -0.55
CCDC85A-201ENST00000407595 PRO0461Q9UI25 63 aa11.63□□□□□ -0.55
CCDC85A-201ENST00000407595 ZNF580Q9UK33 172 aa11.63□□□□□ -0.55
CCDC85A-201ENST00000407595 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
CCDC85A-201ENST00000407595 PROK1P58294 105 aa11.62□□□□□ -0.55
CCDC85A-201ENST00000407595 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
CCDC85A-201ENST00000407595 K7EQG2 157 aa11.62□□□□□ -0.55
CCDC85A-201ENST00000407595 UBE2D3P61077 147 aa11.61□□□□□ -0.55
CCDC85A-201ENST00000407595 UBE2D2P62837 147 aa11.61□□□□□ -0.55
CCDC85A-201ENST00000407595 CLPSL2Q6UWE3 100 aa11.61□□□□□ -0.55
CCDC85A-201ENST00000407595 SETXQ7Z333 2677 aaKnown RBP11.61□□□□□ -0.55
CCDC85A-201ENST00000407595 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
CCDC85A-201ENST00000407595 CRPP02741 224 aa11.61□□□□□ -0.55
CCDC85A-201ENST00000407595 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 CRYGDP07320 174 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 PAX4O43316 350 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 M0QY20 66 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
CCDC85A-201ENST00000407595 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 LINC01006Q8NI28 216 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 A0A0B4J2C4 111 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 CCDC179H3BU77 68 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 LGALS9O00182 355 aa11.59□□□□□ -0.55
CCDC85A-201ENST00000407595 IGHV1-58A0A0C4DH39 117 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 F5H768 121 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 LY6G6DO95868 133 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 TSHBP01222 138 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 PFN2P35080 140 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 LRRC75A-AS1Q8N1F1 130 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 BAALC-AS2P0C853 105 aa11.58□□□□□ -0.56
CCDC85A-201ENST00000407595 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
CCDC85A-201ENST00000407595 C4orf3Q8WVX3 66 aa11.57□□□□□ -0.56
CCDC85A-201ENST00000407595 HIST1H4AP62805 103 aaKnown RBP11.57□□□□□ -0.56
CCDC85A-201ENST00000407595 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
CCDC85A-201ENST00000407595 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
CCDC85A-201ENST00000407595 COL6A5A8TX70 2615 aa11.56□□□□□ -0.56
CCDC85A-201ENST00000407595 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
CCDC85A-201ENST00000407595 MRAPQ8TCY5 172 aa11.56□□□□□ -0.56
CCDC85A-201ENST00000407595 CDKN2A-AS1Q9UH64 79 aa11.56□□□□□ -0.56
CCDC85A-201ENST00000407595 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 HERV-K104P63124 156 aa11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 LINC00482Q8N8I6 264 aa11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 NF1P21359 2839 aa11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 CRLF1O75462 422 aa11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 DCANP1Q8TF63 244 aa11.55□□□□□ -0.56
CCDC85A-201ENST00000407595 CELSR2Q9HCU4 2923 aa11.54□□□□□ -0.56
CCDC85A-201ENST00000407595 H3BT86 120 aa11.54□□□□□ -0.56
CCDC85A-201ENST00000407595 MIAQ16674 131 aa11.53□□□□□ -0.56
CCDC85A-201ENST00000407595 Q6ZTI0 123 aa11.53□□□□□ -0.56
CCDC85A-201ENST00000407595 SPANXA1Q9NS26 97 aa11.53□□□□□ -0.56
CCDC85A-201ENST00000407595 KLLNB2CW77 178 aa11.52□□□□□ -0.56
CCDC85A-201ENST00000407595 Q9HAA7 133 aa11.52□□□□□ -0.57
CCDC85A-201ENST00000407595 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 CMC4P56277 68 aaPredicted RBP11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 DAD1P61803 113 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 HERVK_113P63121 156 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 HRNRQ86YZ3 2850 aaPredicted RBP11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 RBMY1A1P0DJD3 496 aaKnown RBP11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 RBMY1CP0DJD4 496 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 TMEM89A2RUT3 159 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 VSIG2Q96IQ7 327 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 LINC00467Q9BRT7 94 aa11.51□□□□□ -0.57
CCDC85A-201ENST00000407595 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
CCDC85A-201ENST00000407595 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
CCDC85A-201ENST00000407595 H7C423 109 aa11.49□□□□□ -0.57
CCDC85A-201ENST00000407595 FHL3Q13643 280 aa11.49□□□□□ -0.57
CCDC85A-201ENST00000407595 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
CCDC85A-201ENST00000407595 IGKV3D-7A0A0C4DH55 119 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms