RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ATOH7Q8N100 152 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 RHPN1-AS1Q9BWJ2 59 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 UQCR10Q9UDW1 63 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 SMPXQ9UHP9 88 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 ROS1P08922 2347 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 MAP1BP46821 2468 aaKnown RBP2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 TNCP24821 2201 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 ZZEF1O43149 2961 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 RP1L1Q8IWN7 2480 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 DIDO1Q9BTC0 2240 aaKnown RBP2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 LINC01546A6NGU7 62 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 OR4C46A6NHA9 309 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 NPYP01303 97 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 PSMB8P28062 276 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 CKS2P33552 79 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 DEFB113Q30KQ7 82 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 LINC01545Q5VT33 79 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 DEFB125Q8N687 156 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 ZFAND2AQ8N6M9 145 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 OR10AG1Q8NH19 301 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 MS4A6AQ9H2W1 248 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 ST20Q9HBF5 79 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 LAMTOR2Q9Y2Q5 125 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 UFC1Q9Y3C8 167 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 MRPS16Q9Y3D3 137 aaKnown RBP2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 LAMA5O15230 3695 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 PKDREJQ9NTG1 2253 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 ANKHD1Q8IWZ3 2542 aaKnown RBP2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 SPTBN2O15020 2390 aa2.63□□□□□ -1.99
HMGB3P18-201ENST00000406327 IGF2RP11717 2491 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 TRAV21A0A0B4J279 112 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 NCR2O95944 276 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 EVI2AP22794 236 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 FCER1GP30273 86 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 RNASE4P34096 147 aaKnown RBP2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 COL5A1-AS1Q5SY13 56 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 SAMD13Q5VXD3 122 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 C10orf99Q6UWK7 81 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 SMIM15Q7Z3B0 74 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 MYOZ3Q8TDC0 251 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 DCANP1Q8TF63 244 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 MAP1LC3AQ9H492 121 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 NXT2Q9NPJ8 142 aaKnown RBP2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 VPREB3Q9UKI3 123 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 TIMM8BQ9Y5J9 83 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 LRBAP50851 2863 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 CUL9Q8IWT3 2517 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 DCHS2Q6V1P9 2916 aa2.62□□□□□ -1.99
HMGB3P18-201ENST00000406327 BSNQ9UPA5 3926 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 IGKV3-7A0A075B6H7 116 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 A8MWP4 228 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 H3BMM0 161 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 RTL8CO15255 209 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 GNRH2O43555 120 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 HBDP02042 147 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 LGALS1P09382 135 aaKnown RBP2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 ASIPP42127 132 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 FXYD7P58549 80 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 DEFB1P60022 68 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 BATFQ16520 125 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 C4orf26Q17RF5 130 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 LGALS9BQ3B8N2 356 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 SPANXN1Q5VSR9 72 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 LGALS9CQ6DKI2 356 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 FAM19A5Q7Z5A7 132 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 Q8N2B8 174 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 Q8N8P6 123 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 UBE2WQ96B02 151 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 IFI27L1Q96BM0 104 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 B9D2Q9BPU9 175 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 GTSF1LQ9H1H1 148 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 ITPR1Q14643 2758 aa2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P18-201ENST00000406327 PCNX1Q96RV3 2341 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 TRAV26-2A0A0B4J265 109 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 A0A0B4J2C4 111 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 A0A0J9YX75 114 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 TINCRA0A1B0GVN0 87 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 A6NED7 52 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 H3BVH4 76 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 SMIM17P0DL12 118 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 COX8AP10176 69 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 RNASE3P12724 160 aaKnown RBP2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 S100A4P26447 101 aaKnown RBP2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 SNRPD3P62318 126 aaKnown RBP2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 SMAGPQ0VAQ4 97 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 KRTAP13-3Q3SY46 172 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 PSMG4Q5JS54 123 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 ODF3Q96PU9 254 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 PMCHL2Q9BQD1 86 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 C20orf78Q9BR46 151 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 DPH3P1Q9H4G8 78 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 PHLDA3Q9Y5J5 127 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 ARHGAP32A7KAX9 2087 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 SMG1Q96Q15 3661 aaKnown RBP2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 NCOR2Q9Y618 2525 aa2.6□□□□□ -1.99
HMGB3P18-201ENST00000406327 NAV3Q8IVL0 2385 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms