RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 MIFP14174 115 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 DEFB135Q30KP9 77 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 LGALS9BQ3B8N2 356 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 LYZL1Q6UWQ5 148 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 CBLN2Q8IUK8 224 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 ZFP82Q8N141 532 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 C11orf72Q8NBR9 251 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 FRZBQ92765 325 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 C18orf15Q96N68 181 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 TM2D3Q9BRN9 247 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 GNB1LQ9BYB4 327 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 LYRM9A8MSI8 78 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 A8MWV9 139 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 SPINK4O60575 86 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 SCO1O75880 301 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 HLA-DQA1P01909 254 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 HTN1P15515 57 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 NTF3P20783 257 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 HBBP68871 147 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 DEFB121Q5J5C9 76 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 SPANXN1Q5VSR9 72 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 SMIM15Q7Z3B0 74 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 Q8NAQ8 132 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 OR11H2Q8NH07 326 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 OR10AG1Q8NH19 301 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 TMEM191AQ9H0A3 160 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 TIMM8BQ9Y5J9 83 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 URGCP-MRPS24S4R325 110 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
HMGB3P19-201ENST00000403971 TGIF2-C20orf24A0A0A6YYL0 155 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 LRCOL1A6NCL2 159 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 M0R381 172 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 RAB5AP20339 215 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 SYCNQ0VAF6 134 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 FAM104BQ5XKR9 115 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 MRPL54Q6P161 138 aaKnown RBP2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 TMEM136Q6ZRR5 245 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 SBSPONQ8IVN8 264 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 AP1S3Q96PC3 154 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 B9D2Q9BPU9 175 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 C11orf68Q9H3H3 251 aaKnown RBP2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 EDA2RQ9HAV5 297 aa2.88□□□□□ -1.95
HMGB3P19-201ENST00000403971 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRGV1A0A0A0MS02 117 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRAV4A0A0B4J268 109 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 PPBPP02775 128 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 PRM2P04554 102 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 CRYGDP07320 174 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 SMIM17P0DL12 118 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 EVI2AP22794 236 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 MOBPQ13875 183 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 Q6ZTI0 123 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 DPH3P1Q9H4G8 78 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 NOP10Q9NPE3 64 aaKnown RBP2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRAPPC1Q9Y5R8 145 aa2.87□□□□□ -1.95
HMGB3P19-201ENST00000403971 IGLV4-60A0A075B6I1 120 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 MUC21A0A0G2JKD1 596 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 H7C1H1 209 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 PPP1R17O96001 155 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 IGHV3-53P01767 116 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRGC2P03986 189 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 SPART-AS1P0CW21 52 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 RAB4AP20338 218 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 RAB4BP61018 213 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 DEFA6Q01524 100 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 FABP9Q0Z7S8 132 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 CFAP126Q5VTH2 177 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 NTM-AS1Q6ZSK4 140 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 AMN1Q8IY45 258 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 OR4C5Q8NGB2 326 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 MRAP2Q96G30 205 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 MRPL16Q9NX20 251 aaKnown RBP2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 LAMTOR2Q9Y2Q5 125 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 U3KQK5 164 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 STAB2Q8WWQ8 2551 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 COL7A1Q02388 2944 aa2.86□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRGV2A0A075B6R0 118 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRBV10-1A0A0K0K1A3 114 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRBV6-5A0A0K0K1A5 114 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRBV6-4A0A1B0GX49 114 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 C1orf196B1AJZ1 125 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 APCSP02743 223 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 ATP5G1P05496 136 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 CKS2P33552 79 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 EMP1P54849 157 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 DAD1P61803 113 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 MRPL51Q4U2R6 128 aaKnown RBP2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 Q5W150 140 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 ORMDL3Q8N138 153 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 DNAJC30Q96LL9 226 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 C20orf78Q9BR46 151 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 SAMD10Q9BYL1 202 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 RETNQ9HD89 108 aa2.85□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRGV4A0A0C4DH28 118 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 D6R8Y8 96 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 H3BNG1 76 aa2.84□□□□□ -1.95
HMGB3P19-201ENST00000403971 K7EMI3 77 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms