RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
RBM39-206ENST00000403542 A0A0B4J2C4 111 aa8.68□□□□□ -1.02
RBM39-206ENST00000403542 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
RBM39-206ENST00000403542 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
RBM39-206ENST00000403542 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 LINC00694P0DN24 101 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 SBSPONQ8IVN8 264 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 RPL13AP40429 203 aaKnown RBP8.67□□□□□ -1.02
RBM39-206ENST00000403542 ZNF415Q09FC8 603 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 ANAPC13Q9BS18 74 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
RBM39-206ENST00000403542 ITPR2Q14571 2701 aa8.66□□□□□ -1.02
RBM39-206ENST00000403542 TEX29Q8N6K0 151 aa8.66□□□□□ -1.02
RBM39-206ENST00000403542 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
RBM39-206ENST00000403542 Q9H8V8 135 aa8.65□□□□□ -1.02
RBM39-206ENST00000403542 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.02
RBM39-206ENST00000403542 TMEM89A2RUT3 159 aa8.65□□□□□ -1.03
RBM39-206ENST00000403542 H7C423 109 aa8.65□□□□□ -1.03
RBM39-206ENST00000403542 MIAQ16674 131 aa8.65□□□□□ -1.03
RBM39-206ENST00000403542 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.03
RBM39-206ENST00000403542 TMEM101Q96IK0 257 aa8.65□□□□□ -1.03
RBM39-206ENST00000403542 UBR5O95071 2799 aaPredicted RBP8.64□□□□□ -1.03
RBM39-206ENST00000403542 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
RBM39-206ENST00000403542 SNCGO76070 127 aa8.64□□□□□ -1.03
RBM39-206ENST00000403542 PLA2G2AP14555 144 aa8.64□□□□□ -1.03
RBM39-206ENST00000403542 Q6YL49 198 aa8.64□□□□□ -1.03
RBM39-206ENST00000403542 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 TRAV8-4A0A0B4J246 113 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 GAGE4Q13068 117 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 GAGE5Q13069 117 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 Q6ZTI0 123 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 UBE2WQ96B02 151 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 WFDC10AQ9H1F0 79 aa8.63□□□□□ -1.03
RBM39-206ENST00000403542 VWFP04275 2813 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 A0A096LNT2 108 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 COX6CP09669 75 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 TMEM262E9PQX1 116 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 INSP01308 110 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 IGHV4-31P0DP07 118 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 MEIG1Q5JSS6 88 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 C15orf53Q8NAA6 179 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
RBM39-206ENST00000403542 Q8N2B8 174 aa8.61□□□□□ -1.03
RBM39-206ENST00000403542 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
RBM39-206ENST00000403542 DEFB114Q30KQ6 69 aa8.61□□□□□ -1.03
RBM39-206ENST00000403542 STHQ8IWL8 128 aa8.61□□□□□ -1.03
RBM39-206ENST00000403542 B5MCH6 92 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 LOC100131303A0A0U1RQF7 123 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 CITED2Q99967 270 aaPredicted RBP8.6□□□□□ -1.03
RBM39-206ENST00000403542 PEMTQ9UBM1 199 aa8.6□□□□□ -1.03
RBM39-206ENST00000403542 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
RBM39-206ENST00000403542 NOP10Q9NPE3 64 aaKnown RBP8.59□□□□□ -1.03
RBM39-206ENST00000403542 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
RBM39-206ENST00000403542 TOMM7Q9P0U1 55 aa8.59□□□□□ -1.03
RBM39-206ENST00000403542 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
RBM39-206ENST00000403542 Q96MF0 132 aa8.59□□□□□ -1.03
RBM39-206ENST00000403542 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
RBM39-206ENST00000403542 DSCR9P59020 149 aa8.59□□□□□ -1.04
RBM39-206ENST00000403542 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.04
RBM39-206ENST00000403542 C1orf158Q8N1D5 194 aa8.59□□□□□ -1.04
RBM39-206ENST00000403542 LINC00308Q8TCZ7 52 aa8.59□□□□□ -1.04
RBM39-206ENST00000403542 CITED1Q99966 193 aa8.58□□□□□ -1.04
RBM39-206ENST00000403542 CR1P17927 2039 aa8.58□□□□□ -1.04
RBM39-206ENST00000403542 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
RBM39-206ENST00000403542 C3orf56Q8N813 242 aa8.58□□□□□ -1.04
RBM39-206ENST00000403542 NHLRC4P0CG21 123 aaPredicted RBP8.57□□□□□ -1.04
RBM39-206ENST00000403542 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
RBM39-206ENST00000403542 GAGE7O76087 117 aa8.57□□□□□ -1.04
RBM39-206ENST00000403542 GAGE12FP0CL80 117 aa8.57□□□□□ -1.04
RBM39-206ENST00000403542 GAGE12GP0CL81 117 aa8.57□□□□□ -1.04
RBM39-206ENST00000403542 GAGE12IP0CL82 117 aa8.57□□□□□ -1.04
RBM39-206ENST00000403542 J3QLI3 93 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 LST1O00453 97 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 NDUFA1O15239 70 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 C11orf68Q9H3H3 251 aaKnown RBP8.56□□□□□ -1.04
RBM39-206ENST00000403542 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 CCDC179H3BU77 68 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 RS1O15537 224 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 HIST2H2BCQ6DN03 193 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 YAE1D1Q9NRH1 226 aa8.56□□□□□ -1.04
RBM39-206ENST00000403542 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
RBM39-206ENST00000403542 NDUFV3P56181 108 aaKnown RBP8.55□□□□□ -1.04
RBM39-206ENST00000403542 RPL36AP83881 106 aaKnown RBP8.55□□□□□ -1.04
RBM39-206ENST00000403542 C4orf3Q8WVX3 66 aa8.55□□□□□ -1.04
RBM39-206ENST00000403542 RPL36ALQ969Q0 106 aaKnown RBP8.55□□□□□ -1.04
RBM39-206ENST00000403542 BBC3Q96PG8 261 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms