RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 NDUFA11Q86Y39 141 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 PDZD2O15018 2839 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 A0A096LPF7 62 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 LEPROTO15243 131 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 C10orf126Q8N4M7 172 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 C11orf68Q9H3H3 251 aaKnown RBP3.16□□□□□ -1.9
SMC6-203ENST00000402989 TOMM7Q9P0U1 55 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 NDUFA12Q9UI09 145 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 OTOGQ6ZRI0 2925 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 C9JAW5 83 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 TCL1BO95988 128 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 IGHV3-30P01768 117 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 IGHV3-30-5P0DP03 117 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 DEFB130BP0DP73 79 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 DEFB130AP0DP74 79 aa3.16□□□□□ -1.9
SMC6-203ENST00000402989 SPANXB1Q9NS25 103 aaPredicted RBP3.16□□□□□ -1.9
SMC6-203ENST00000402989 ANK3Q12955 4377 aaKnown RBP3.15□□□□□ -1.9
SMC6-203ENST00000402989 LINC00694P0DN24 101 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 NFE4Q86UQ8 179 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 KRTAP1-3Q8IUG1 177 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 C1orf158Q8N1D5 194 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 POM121L12Q8N7R1 296 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 SLC25A29Q8N8R3 303 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 CDKN2A-AS1Q9UH64 79 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.9
SMC6-203ENST00000402989 A0A0J9YXY3 114 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 CIDEAO60543 219 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 CHCHD7Q9BUK0 85 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 ERG28Q9UKR5 140 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 BAHCC1Q9P281 2608 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 F8W1H4 67 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 J3QR89 54 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 DEFB4AO15263 64 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 UBE2D1P51668 147 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 RPL32P62910 135 aaKnown RBP3.15□□□□□ -1.91
SMC6-203ENST00000402989 GAGE6Q13070 117 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 ADAMTSL4-AS1Q5T5F5 129 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 C11orf72Q8NBR9 251 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 LINC01006Q8NI28 216 aa3.15□□□□□ -1.91
SMC6-203ENST00000402989 TMEM238C9JI98 176 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 UBE2L6O14933 153 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 RPL36AP83881 106 aaKnown RBP3.14□□□□□ -1.91
SMC6-203ENST00000402989 COX6A2Q02221 97 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 MEIG1Q5JSS6 88 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 RPL36ALQ969Q0 106 aaKnown RBP3.14□□□□□ -1.91
SMC6-203ENST00000402989 AMELXQ99217 191 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 C1orf43Q9BWL3 253 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 UBE2D4Q9Y2X8 147 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 GAGE12HA6NDE8 117 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 EIF4EBP3O60516 100 aaPredicted RBP3.14□□□□□ -1.91
SMC6-203ENST00000402989 SMCPP49901 116 aaPredicted RBP3.14□□□□□ -1.91
SMC6-203ENST00000402989 KMT2BQ9UMN6 2715 aaPredicted RBP3.14□□□□□ -1.91
SMC6-203ENST00000402989 RNF152Q8N8N0 203 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 CLEC2BQ92478 149 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 Q9H8V8 135 aa3.14□□□□□ -1.91
SMC6-203ENST00000402989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.13□□□□□ -1.91
SMC6-203ENST00000402989 FAM104AQ969W3 186 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 NSD1Q96L73 2696 aaPredicted RBP3.13□□□□□ -1.91
SMC6-203ENST00000402989 K7EQD1 137 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 LYRM7Q5U5X0 104 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 PRIMA1Q86XR5 153 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 ANKRD29Q8N6D5 301 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 PRO0461Q9UI25 63 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 HIVEP1P15822 2718 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 IGHV1-58A0A0C4DH39 117 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 A0A1B0GV72 72 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 TMEM262E9PQX1 116 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 J3QL48 77 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 RS1O15537 224 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 IGHV3-33P01772 117 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 RPL13AP40429 203 aaKnown RBP3.13□□□□□ -1.91
SMC6-203ENST00000402989 Q8N2B8 174 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 LINC00482Q8N8I6 264 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 VSIG2Q96IQ7 327 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
SMC6-203ENST00000402989 TRIAP1O43715 76 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 SLC25A20O43772 301 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 CRLF1O75462 422 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 HTN3P15516 51 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 LRRC75A-AS1Q8N1F1 130 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 NTN5Q8WTR8 489 aaPredicted RBP3.12□□□□□ -1.91
SMC6-203ENST00000402989 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 C1QTNF4Q9BXJ3 329 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 SPANXA1Q9NS26 97 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 F8P00451 2351 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 MRPS36P82909 103 aaKnown RBP3.12□□□□□ -1.91
SMC6-203ENST00000402989 FOXI1Q12951 378 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 TMEM263Q8WUH6 116 aaKnown RBP3.12□□□□□ -1.91
SMC6-203ENST00000402989 NOTCH1P46531 2555 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 STAB1Q9NY15 2570 aa3.12□□□□□ -1.91
SMC6-203ENST00000402989 C5orf38Q86SI9 138 aa3.11□□□□□ -1.91
SMC6-203ENST00000402989 TINCRA0A1B0GVN0 87 aa3.11□□□□□ -1.91
SMC6-203ENST00000402989 J3QKU1 62 aa3.11□□□□□ -1.91
SMC6-203ENST00000402989 UBE2D3P61077 147 aa3.11□□□□□ -1.91
SMC6-203ENST00000402989 UBE2D2P62837 147 aa3.11□□□□□ -1.91
SMC6-203ENST00000402989 PIK3CD-AS1Q5SR53 167 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms