RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.72
GABPA-202ENST00000400075 CRYBA4P53673 196 aa10.52□□□□□ -0.72
GABPA-202ENST00000400075 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.73
GABPA-202ENST00000400075 C9orf153Q5TBE3 101 aa10.52□□□□□ -0.73
GABPA-202ENST00000400075 Q8N2B8 174 aa10.52□□□□□ -0.73
GABPA-202ENST00000400075 M0QY20 66 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 ATG2AQ2TAZ0 1938 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 TRBV20-1A0A075B6N2 111 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 HAMPP81172 84 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 TDRG1Q3Y452 100 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 LOC100131303A0A0U1RQF7 123 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 DIRC1Q969H9 104 aa10.51□□□□□ -0.73
GABPA-202ENST00000400075 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
GABPA-202ENST00000400075 C11orf86A6NJI1 115 aa10.5□□□□□ -0.73
GABPA-202ENST00000400075 Q6ZVH6 145 aa10.5□□□□□ -0.73
GABPA-202ENST00000400075 DAND5Q8N907 189 aa10.5□□□□□ -0.73
GABPA-202ENST00000400075 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
GABPA-202ENST00000400075 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
GABPA-202ENST00000400075 H0YGX0 51 aa10.48□□□□□ -0.73
GABPA-202ENST00000400075 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
GABPA-202ENST00000400075 IGLV2-8P01709 118 aa10.48□□□□□ -0.73
GABPA-202ENST00000400075 FHL3Q13643 280 aa10.48□□□□□ -0.73
GABPA-202ENST00000400075 PRR9Q5T870 116 aa10.48□□□□□ -0.73
GABPA-202ENST00000400075 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
GABPA-202ENST00000400075 C1orf134Q5TEV5 83 aa10.47□□□□□ -0.73
GABPA-202ENST00000400075 ORMDL1Q9P0S3 153 aa10.47□□□□□ -0.73
GABPA-202ENST00000400075 RANBP2P49792 3224 aaKnown RBP10.47□□□□□ -0.73
GABPA-202ENST00000400075 NDUFS5O43920 106 aa10.47□□□□□ -0.73
GABPA-202ENST00000400075 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
GABPA-202ENST00000400075 FAM19A1Q7Z5A9 133 aa10.47□□□□□ -0.73
GABPA-202ENST00000400075 CRIP1P50238 77 aa10.47□□□□□ -0.73
GABPA-202ENST00000400075 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
GABPA-202ENST00000400075 CFC1P0CG37 223 aa10.46□□□□□ -0.73
GABPA-202ENST00000400075 CPAMD8Q8IZJ3 1885 aa10.46□□□□□ -0.74
GABPA-202ENST00000400075 NDUFB1O75438 58 aa10.46□□□□□ -0.74
GABPA-202ENST00000400075 PCP2Q8IVA1 136 aa10.46□□□□□ -0.74
GABPA-202ENST00000400075 XAGE1AQ9HD64 81 aa10.46□□□□□ -0.74
GABPA-202ENST00000400075 C1orf158Q8N1D5 194 aa10.46□□□□□ -0.74
GABPA-202ENST00000400075 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
GABPA-202ENST00000400075 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 CD164L2Q6UWJ8 174 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 LINC01545Q5VT33 79 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 CEND1Q8N111 149 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 OCIAD2Q56VL3 154 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 LINC00173Q6ZV60 143 aa10.45□□□□□ -0.74
GABPA-202ENST00000400075 MUSTN1Q8IVN3 82 aa10.44□□□□□ -0.74
GABPA-202ENST00000400075 A0A096LNI7 61 aa10.44□□□□□ -0.74
GABPA-202ENST00000400075 UBE2D1P51668 147 aa10.44□□□□□ -0.74
GABPA-202ENST00000400075 CHCHD7Q9BUK0 85 aa10.44□□□□□ -0.74
GABPA-202ENST00000400075 CITED1Q99966 193 aa10.43□□□□□ -0.74
GABPA-202ENST00000400075 AGRNO00468 2067 aa10.43□□□□□ -0.74
GABPA-202ENST00000400075 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
GABPA-202ENST00000400075 C11orf21Q9P2W6 132 aa10.43□□□□□ -0.74
GABPA-202ENST00000400075 A4D1N5 150 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 E9PLD3 99 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 LINC00474Q9P2X8 69 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 BAHCC1Q9P281 2608 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 MUC4Q99102 2169 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 A0A1B0GXF2 115 aa10.42□□□□□ -0.74
GABPA-202ENST00000400075 COX7BP24311 80 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 IGLV4-3A0A075B6K6 122 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 TRBV6-5A0A0K0K1A5 114 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 FSHBP01225 129 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 TRBV27A0A0K0K1C4 114 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 ZNF292O60281 2723 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 TRACP01848 142 aa10.41□□□□□ -0.74
GABPA-202ENST00000400075 IGLV5-52A0A0A0MRZ9 124 aa10.4□□□□□ -0.74
GABPA-202ENST00000400075 LOC107984640A0A0U1RRK4 108 aa10.4□□□□□ -0.74
GABPA-202ENST00000400075 UBE2D3P61077 147 aa10.4□□□□□ -0.74
GABPA-202ENST00000400075 UBE2D2P62837 147 aa10.4□□□□□ -0.74
GABPA-202ENST00000400075 BAALC-AS2P0C853 105 aa10.39□□□□□ -0.75
GABPA-202ENST00000400075 CHD7Q9P2D1 2997 aa10.39□□□□□ -0.75
GABPA-202ENST00000400075 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
GABPA-202ENST00000400075 ANKRD39Q53RE8 183 aa10.39□□□□□ -0.75
GABPA-202ENST00000400075 ODF1Q14990 250 aa10.39□□□□□ -0.75
GABPA-202ENST00000400075 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
GABPA-202ENST00000400075 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
GABPA-202ENST00000400075 C12orf74Q32Q52 190 aa10.38□□□□□ -0.75
GABPA-202ENST00000400075 TNRC6BQ9UPQ9 1833 aaKnown RBP10.38□□□□□ -0.75
GABPA-202ENST00000400075 SPATA3Q8NHX4 192 aa10.38□□□□□ -0.75
GABPA-202ENST00000400075 H3BQ85 93 aa10.38□□□□□ -0.75
GABPA-202ENST00000400075 WWC2-AS2Q96NR7 200 aa10.37□□□□□ -0.75
GABPA-202ENST00000400075 PCNTO95613 3336 aa10.37□□□□□ -0.75
GABPA-202ENST00000400075 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
GABPA-202ENST00000400075 BPTFQ12830 3046 aa10.37□□□□□ -0.75
GABPA-202ENST00000400075 TTTY13Q9BZ97 58 aa10.36□□□□□ -0.75
GABPA-202ENST00000400075 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
GABPA-202ENST00000400075 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
GABPA-202ENST00000400075 K7ERJ3 54 aa10.36□□□□□ -0.75
GABPA-202ENST00000400075 ANKRD29Q8N6D5 301 aa10.36□□□□□ -0.75
GABPA-202ENST00000400075 COA6Q5JTJ3 125 aaKnown RBP10.35□□□□□ -0.75
GABPA-202ENST00000400075 PYGO1Q9Y3Y4 419 aa10.35□□□□□ -0.75
GABPA-202ENST00000400075 SBSPONQ8IVN8 264 aa10.35□□□□□ -0.75
GABPA-202ENST00000400075 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
GABPA-202ENST00000400075 MUC7Q8TAX7 377 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms