RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 AMMECR1LQ6DCA0 310 aa8.27□□□□□ -1.09
HLA-DQB1-203ENST00000399082 RNASEKQ6P5S7 137 aaKnown RBP8.27□□□□□ -1.09
HLA-DQB1-203ENST00000399082 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
HLA-DQB1-203ENST00000399082 TIMM21Q9BVV7 248 aa8.27□□□□□ -1.09
HLA-DQB1-203ENST00000399082 PKD1P98161 4303 aa8.27□□□□□ -1.09
HLA-DQB1-203ENST00000399082 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 K7EMI3 77 aa8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 REG3AQ06141 175 aa8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 Q6ZUT4 128 aa8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 PRSS3P2Q8NHM4 247 aa8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 CDC42SE2Q9NRR3 84 aa8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 CSDC2Q9Y534 153 aaKnown RBP8.26□□□□□ -1.09
HLA-DQB1-203ENST00000399082 A0A096LNJ9 63 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 TRAV8-3A0A0A6YYJ7 113 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 OR5A1Q8NGJ0 315 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 OPRPNQ99935 248 aaPredicted RBP8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 HECTD4Q9Y4D8 3996 aa8.25□□□□□ -1.09
HLA-DQB1-203ENST00000399082 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 CRPP02741 224 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 LINC00310P59036 64 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 WFDC2Q14508 124 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 RNASE13Q5GAN3 156 aaKnown RBP8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 KRTAP9-2Q9BYQ4 174 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
HLA-DQB1-203ENST00000399082 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 PRSS29PA6NIE9 313 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 Q0VG73 95 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 MIAQ16674 131 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 FA2HQ7L5A8 372 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 ZNF664Q8N3J9 261 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 CYSLTR1Q9Y271 337 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
HLA-DQB1-203ENST00000399082 IGLV10-54A0A075B6I4 117 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 IGLV4-3A0A075B6K6 122 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 IGKV3OR2-268A0A0C4DH90 116 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 IGIPA6NJ69 53 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 LINC00614P0C842 121 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 TOMM6Q96B49 74 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
HLA-DQB1-203ENST00000399082 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.1
HLA-DQB1-203ENST00000399082 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
HLA-DQB1-203ENST00000399082 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
HLA-DQB1-203ENST00000399082 C1orf43Q9BWL3 253 aa8.21□□□□□ -1.1
HLA-DQB1-203ENST00000399082 A0A087WTM6 91 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 PMCHL1Q16048 86 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 RMI2Q96E14 147 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 TM2D2Q9BX73 214 aa8.2□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BKO60814 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BJP06899 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BOP23527 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BBP33778 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BDP58876 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BCP62807 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 SMAGPQ0VAQ4 97 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST2H2BEQ16778 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
HLA-DQB1-203ENST00000399082 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 DYNC1H1Q14204 4646 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 LECT2O14960 151 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 PSCAO43653 123 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 NUPR1O60356 82 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 CHCHD10Q8WYQ3 142 aaPredicted RBP8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 AMELXQ99217 191 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 COX11Q9Y6N1 276 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 PKHD1P08F94 4074 aa8.18□□□□□ -1.1
HLA-DQB1-203ENST00000399082 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 CCL25O15444 150 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 SERF1AO75920 110 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 NPSP0C0P6 89 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 RAB5BP61020 215 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 FOXI1Q12951 378 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 ERASQ7Z444 233 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 CHCHD1Q96BP2 118 aaKnown RBP8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 TMEM141Q96I45 108 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 SCGB3A1Q96QR1 104 aa8.17□□□□□ -1.1
HLA-DQB1-203ENST00000399082 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
HLA-DQB1-203ENST00000399082 HBDP02042 147 aa8.16□□□□□ -1.1
HLA-DQB1-203ENST00000399082 G0S2P27469 103 aa8.16□□□□□ -1.1
HLA-DQB1-203ENST00000399082 FUSP35637 526 aaKnown RBP eCLIP8.16□□□□□ -1.1
HLA-DQB1-203ENST00000399082 XCL1P47992 114 aa8.16□□□□□ -1.1
HLA-DQB1-203ENST00000399082 KRTAP10-2P60368 255 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms