RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.09□□□□□ -0.15
COL13A1-205ENST00000398978 TEX49A0A1B0GTD5 131 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 FSHBP01225 129 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 DGAT2L7PQ6IED9 249 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 FN1P02751 2386 aaKnown RBP14.09□□□□□ -0.15
COL13A1-205ENST00000398978 LINC00694P0DN24 101 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 DEFB114Q30KQ6 69 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 BBC3Q96PG8 261 aaPredicted RBP14.09□□□□□ -0.15
COL13A1-205ENST00000398978 LINC01620Q4KN68 170 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 RNF152Q8N8N0 203 aa14.09□□□□□ -0.15
COL13A1-205ENST00000398978 Q96MF0 132 aa14.08□□□□□ -0.16
COL13A1-205ENST00000398978 PEMTQ9UBM1 199 aa14.08□□□□□ -0.16
COL13A1-205ENST00000398978 TRAV26-1A0A087WT03 109 aa14.08□□□□□ -0.16
COL13A1-205ENST00000398978 TINCRA0A1B0GVN0 87 aa14.08□□□□□ -0.16
COL13A1-205ENST00000398978 A0A1B0GV72 72 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 INSP01308 110 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 UBR5O95071 2799 aaPredicted RBP14.06□□□□□ -0.16
COL13A1-205ENST00000398978 TRAV13-1A0A0B4J241 112 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 ATXN8Q156A1 80 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 ODF3L2Q3SX64 289 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 SPANXA1Q9NS26 97 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 ICOSQ9Y6W8 199 aa14.06□□□□□ -0.16
COL13A1-205ENST00000398978 TMEM101Q96IK0 257 aa14.05□□□□□ -0.16
COL13A1-205ENST00000398978 MIAQ16674 131 aa14.05□□□□□ -0.16
COL13A1-205ENST00000398978 Q6ZTI0 123 aa14.04□□□□□ -0.16
COL13A1-205ENST00000398978 C4orf3Q8WVX3 66 aa14.04□□□□□ -0.16
COL13A1-205ENST00000398978 EDA2RQ9HAV5 297 aa14.04□□□□□ -0.16
COL13A1-205ENST00000398978 A8MTW9 85 aa14.04□□□□□ -0.16
COL13A1-205ENST00000398978 C1orf158Q8N1D5 194 aa14.04□□□□□ -0.16
COL13A1-205ENST00000398978 WFDC10AQ9H1F0 79 aa14.03□□□□□ -0.16
COL13A1-205ENST00000398978 RPL13AP40429 203 aaKnown RBP14.03□□□□□ -0.16
COL13A1-205ENST00000398978 STHQ8IWL8 128 aa14.03□□□□□ -0.16
COL13A1-205ENST00000398978 PLA2G2AP14555 144 aa14.02□□□□□ -0.16
COL13A1-205ENST00000398978 Q9H8V8 135 aa14.02□□□□□ -0.16
COL13A1-205ENST00000398978 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
COL13A1-205ENST00000398978 RS1O15537 224 aa14.02□□□□□ -0.17
COL13A1-205ENST00000398978 GAGE4Q13068 117 aa14.02□□□□□ -0.17
COL13A1-205ENST00000398978 GAGE5Q13069 117 aa14.02□□□□□ -0.17
COL13A1-205ENST00000398978 ZFAND6Q6FIF0 208 aa14.02□□□□□ -0.17
COL13A1-205ENST00000398978 TRBV30A0A0K0K1B3 111 aa14.01□□□□□ -0.17
COL13A1-205ENST00000398978 SPANXDQ9BXN6 97 aa14.01□□□□□ -0.17
COL13A1-205ENST00000398978 SPANXCQ9NY87 97 aa14.01□□□□□ -0.17
COL13A1-205ENST00000398978 CRLF1O75462 422 aa14□□□□□ -0.17
COL13A1-205ENST00000398978 C2orf82Q6UX34 121 aa14□□□□□ -0.17
COL13A1-205ENST00000398978 LINC00242Q5T6M2 205 aa14□□□□□ -0.17
COL13A1-205ENST00000398978 H7C423 109 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 BEAN1Q3B7T3 259 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 NTM-AS1Q6ZSK4 140 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 IGKV3OR2-268A0A0C4DH90 116 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 SHISA2Q6UWI4 295 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 DEFB113Q30KQ7 82 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 HIST2H2BCQ6DN03 193 aa13.99□□□□□ -0.17
COL13A1-205ENST00000398978 NOP10Q9NPE3 64 aaKnown RBP13.98□□□□□ -0.17
COL13A1-205ENST00000398978 NBEAL2Q6ZNJ1 2754 aa13.98□□□□□ -0.17
COL13A1-205ENST00000398978 TRBV10-2A0A0K0K1G8 114 aa13.98□□□□□ -0.17
COL13A1-205ENST00000398978 LOC100131303A0A0U1RQF7 123 aa13.98□□□□□ -0.17
COL13A1-205ENST00000398978 Q8N2B8 174 aa13.97□□□□□ -0.17
COL13A1-205ENST00000398978 TRAV4A0A0B4J268 109 aa13.96□□□□□ -0.17
COL13A1-205ENST00000398978 RNF183Q96D59 192 aa13.96□□□□□ -0.17
COL13A1-205ENST00000398978 DNAJC30Q96LL9 226 aa13.96□□□□□ -0.17
COL13A1-205ENST00000398978 CITED2Q99967 270 aaPredicted RBP13.96□□□□□ -0.18
COL13A1-205ENST00000398978 RPL35AP18077 110 aaKnown RBP13.95□□□□□ -0.18
COL13A1-205ENST00000398978 SOSTDC1Q6X4U4 206 aa13.95□□□□□ -0.18
COL13A1-205ENST00000398978 UBE2WQ96B02 151 aa13.94□□□□□ -0.18
COL13A1-205ENST00000398978 NDUFA1O15239 70 aa13.94□□□□□ -0.18
COL13A1-205ENST00000398978 COX6CP09669 75 aa13.94□□□□□ -0.18
COL13A1-205ENST00000398978 WFDC11Q8NEX6 87 aa13.94□□□□□ -0.18
COL13A1-205ENST00000398978 GCN1Q92616 2671 aaKnown RBP13.94□□□□□ -0.18
COL13A1-205ENST00000398978 MEIG1Q5JSS6 88 aa13.94□□□□□ -0.18
COL13A1-205ENST00000398978 CCL24O00175 119 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 LINC00308Q8TCZ7 52 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 ESM1Q9NQ30 184 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 DNAJC9-AS1A6NH13 148 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 GAGE7O76087 117 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 GAGE12FP0CL80 117 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 GAGE12GP0CL81 117 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 GAGE12IP0CL82 117 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 TIRAPP58753 221 aa13.93□□□□□ -0.18
COL13A1-205ENST00000398978 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
COL13A1-205ENST00000398978 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
COL13A1-205ENST00000398978 TRAV8-4A0A0B4J246 113 aa13.92□□□□□ -0.18
COL13A1-205ENST00000398978 SMIM1B2RUZ4 78 aa13.92□□□□□ -0.18
COL13A1-205ENST00000398978 TMEM262E9PQX1 116 aa13.92□□□□□ -0.18
COL13A1-205ENST00000398978 K7EQD1 137 aa13.92□□□□□ -0.18
COL13A1-205ENST00000398978 PIK3CD-AS1Q5SR53 167 aa13.92□□□□□ -0.18
COL13A1-205ENST00000398978 PRIMA1Q86XR5 153 aa13.92□□□□□ -0.18
COL13A1-205ENST00000398978 TEX29Q8N6K0 151 aa13.91□□□□□ -0.18
COL13A1-205ENST00000398978 YAE1D1Q9NRH1 226 aa13.91□□□□□ -0.18
COL13A1-205ENST00000398978 IGLV5-45A0A087WSX0 123 aa13.91□□□□□ -0.18
COL13A1-205ENST00000398978 TTC32Q5I0X7 151 aa13.91□□□□□ -0.18
COL13A1-205ENST00000398978 SS18L2Q9UHA2 77 aa13.91□□□□□ -0.18
COL13A1-205ENST00000398978 HERVK_113P63121 156 aa13.9□□□□□ -0.18
COL13A1-205ENST00000398978 CIRBPQ14011 172 aaKnown RBP13.9□□□□□ -0.18
COL13A1-205ENST00000398978 KRTAP1-3Q8IUG1 177 aa13.9□□□□□ -0.18
COL13A1-205ENST00000398978 ITPR2Q14571 2701 aa13.9□□□□□ -0.18
COL13A1-205ENST00000398978 LST1O00453 97 aa13.89□□□□□ -0.19
COL13A1-205ENST00000398978 SNCGO76070 127 aa13.89□□□□□ -0.19
COL13A1-205ENST00000398978 ANAPC13Q9BS18 74 aa13.89□□□□□ -0.19
COL13A1-205ENST00000398978 TRGV2A0A075B6R0 118 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms