RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 KLK5Q9Y337 293 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 FRYQ5TBA9 3013 aa8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 HIGD2AQ9BW72 106 aa8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 FUSP35637 526 aaKnown RBP eCLIP8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 PROK1P58294 105 aa8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 LINC00574Q9H8X3 128 aa8.66□□□□□ -1.02
PCDHGA8-201ENST00000398604 IGKV3D-7A0A0C4DH55 119 aa8.65□□□□□ -1.02
PCDHGA8-201ENST00000398604 IFITM1P13164 125 aa8.65□□□□□ -1.02
PCDHGA8-201ENST00000398604 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
PCDHGA8-201ENST00000398604 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.03
PCDHGA8-201ENST00000398604 WFDC2Q14508 124 aa8.65□□□□□ -1.03
PCDHGA8-201ENST00000398604 ODF1Q14990 250 aa8.65□□□□□ -1.03
PCDHGA8-201ENST00000398604 AVPP01185 164 aa8.64□□□□□ -1.03
PCDHGA8-201ENST00000398604 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
PCDHGA8-201ENST00000398604 TRBV6-1A0A0K0K1D8 114 aa8.64□□□□□ -1.03
PCDHGA8-201ENST00000398604 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
PCDHGA8-201ENST00000398604 PLA2G2AP14555 144 aa8.64□□□□□ -1.03
PCDHGA8-201ENST00000398604 C11orf71Q6IPW1 123 aa8.64□□□□□ -1.03
PCDHGA8-201ENST00000398604 TOMM6Q96B49 74 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 XAGE1AQ9HD64 81 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 TRBV10-1A0A0K0K1A3 114 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
PCDHGA8-201ENST00000398604 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 E9PLD3 99 aa8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 RNF183Q96D59 192 aa8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 TET2Q6N021 2002 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 A0A1B0GXF2 115 aa8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 H0YGX0 51 aa8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 PTH2Q96A98 100 aa8.62□□□□□ -1.03
PCDHGA8-201ENST00000398604 REG3AQ06141 175 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 MBD6Q96DN6 1003 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 LY6LH3BQJ8 138 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 NREPQ16612 68 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
PCDHGA8-201ENST00000398604 EBI3Q14213 229 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 MLST8Q9BVC4 326 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 M0R2N4 97 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 CRIP1P50238 77 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 LINC00310P59036 64 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 CRYGBP07316 175 aa8.6□□□□□ -1.03
PCDHGA8-201ENST00000398604 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
PCDHGA8-201ENST00000398604 CITED1Q99966 193 aa8.59□□□□□ -1.03
PCDHGA8-201ENST00000398604 CRYGDP07320 174 aa8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 CHCHD10Q8WYQ3 142 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 A0A1W2PPR1 153 aa8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA8-201ENST00000398604 A0A087WZ39 114 aa8.57□□□□□ -1.04
PCDHGA8-201ENST00000398604 LGALS9O00182 355 aa8.57□□□□□ -1.04
PCDHGA8-201ENST00000398604 A8MZ25 164 aa8.57□□□□□ -1.04
PCDHGA8-201ENST00000398604 PSMB8P28062 276 aa8.57□□□□□ -1.04
PCDHGA8-201ENST00000398604 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
PCDHGA8-201ENST00000398604 AGRNO00468 2067 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 AKAP13Q12802 2813 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 NDUFB1O75438 58 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 LOC100131303A0A0U1RQF7 123 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 HILS1P60008 231 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 PIK3CD-AS1Q5SR53 167 aa8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 DSPP15924 2871 aaKnown RBP8.56□□□□□ -1.04
PCDHGA8-201ENST00000398604 LOC400499M0QZD8 3231 aa8.55□□□□□ -1.04
PCDHGA8-201ENST00000398604 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
PCDHGA8-201ENST00000398604 CXCL5P42830 114 aa8.55□□□□□ -1.04
PCDHGA8-201ENST00000398604 B5MCH6 92 aa8.55□□□□□ -1.04
PCDHGA8-201ENST00000398604 EDN2P20800 178 aa8.55□□□□□ -1.04
PCDHGA8-201ENST00000398604 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
PCDHGA8-201ENST00000398604 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
PCDHGA8-201ENST00000398604 H0Y9J4 135 aa8.54□□□□□ -1.04
PCDHGA8-201ENST00000398604 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
PCDHGA8-201ENST00000398604 SPATA25Q9BR10 227 aa8.54□□□□□ -1.04
PCDHGA8-201ENST00000398604 A0A0J9YXY3 114 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 M0QY20 66 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 PRR9Q5T870 116 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 RBX1P62877 108 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 IGLV4-3A0A075B6K6 122 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 C5orf47Q569G3 176 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 C14orf132Q9NPU4 83 aa8.53□□□□□ -1.04
PCDHGA8-201ENST00000398604 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.04
PCDHGA8-201ENST00000398604 SLPIP03973 132 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms