RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 FAM222AQ5U5X8 452 aa5.18□□□□□ -1.58
RGPD1-201ENST00000398193 IGHV3-30P01768 117 aa5.18□□□□□ -1.58
RGPD1-201ENST00000398193 IGHV3-30-5P0DP03 117 aa5.18□□□□□ -1.58
RGPD1-201ENST00000398193 IGHV3-30-3P0DP02 117 aa5.18□□□□□ -1.58
RGPD1-201ENST00000398193 TACC2O95359 2948 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 PAX4O43316 350 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 TSPEAR-AS2P59090 65 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 SPATA3Q8NHX4 192 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 GYPEP15421 78 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 SAMD5Q5TGI4 173 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 NACAE9PAV3 2078 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 K7EP34 96 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 MRPL23Q16540 153 aaKnown RBP5.17□□□□□ -1.58
RGPD1-201ENST00000398193 C12orf74Q32Q52 190 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 LINC00242Q5T6M2 205 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 ICOSQ9Y6W8 199 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 FXYD2P54710 66 aa5.17□□□□□ -1.58
RGPD1-201ENST00000398193 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 KRTAP10-11P60412 298 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 DEFB135Q30KP9 77 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 Q9UF83 564 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 FABP2P12104 132 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 KPRPQ5T749 579 aaPredicted RBP5.16□□□□□ -1.58
RGPD1-201ENST00000398193 DNAH3Q8TD57 4116 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 F5H768 121 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 DEFB130BP0DP73 79 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 DEFB130AP0DP74 79 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 SRSF9Q13242 221 aaKnown RBP eCLIP5.16□□□□□ -1.58
RGPD1-201ENST00000398193 CIRBPQ14011 172 aaKnown RBP5.16□□□□□ -1.58
RGPD1-201ENST00000398193 DOPEY2Q9Y3R5 2298 aa5.16□□□□□ -1.58
RGPD1-201ENST00000398193 LRRK2Q5S007 2527 aa5.15□□□□□ -1.58
RGPD1-201ENST00000398193 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.58
RGPD1-201ENST00000398193 VAMP3Q15836 100 aa5.15□□□□□ -1.59
RGPD1-201ENST00000398193 MIAQ16674 131 aa5.15□□□□□ -1.59
RGPD1-201ENST00000398193 LELP1Q5T871 98 aa5.15□□□□□ -1.59
RGPD1-201ENST00000398193 CEMP1Q6PRD7 247 aaPredicted RBP5.15□□□□□ -1.59
RGPD1-201ENST00000398193 LOC100131303A0A0U1RQF7 123 aa5.15□□□□□ -1.59
RGPD1-201ENST00000398193 CELSR2Q9HCU4 2923 aa5.15□□□□□ -1.59
RGPD1-201ENST00000398193 IGLL5B9A064 214 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 EMP1P54849 157 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 TCTAP57738 103 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 SS18Q15532 418 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 LITAFQ99732 161 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 TTTY13Q9BZ97 58 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 CSMD2Q7Z408 3487 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 MUC7Q8TAX7 377 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 SMIM1B2RUZ4 78 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 K7EP13 123 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 CHCHD5Q9BSY4 110 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 SPINK8P0C7L1 97 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 PRIMA1Q86XR5 153 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 PTPN13Q12923 2485 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 C10orf126Q8N4M7 172 aa5.14□□□□□ -1.59
RGPD1-201ENST00000398193 NHP2Q9NX24 153 aaKnown RBP5.14□□□□□ -1.59
RGPD1-201ENST00000398193 SPTAN1Q13813 2472 aaKnown RBP5.13□□□□□ -1.59
RGPD1-201ENST00000398193 A0A087WZ39 114 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 COX6A2Q02221 97 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 CREBBPQ92793 2442 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 GAGE10A6NGK3 116 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 GAGE6Q13070 117 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 EPG5Q9HCE0 2579 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 CMYA5Q8N3K9 4069 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 CXCL5P42830 114 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 UNC79Q9P2D8 2635 aa5.13□□□□□ -1.59
RGPD1-201ENST00000398193 H3BUT2 72 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 COX7B2Q8TF08 81 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
RGPD1-201ENST00000398193 LINC00959A0A1B0GUT2 108 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 M0QXV9 152 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 DEFB104AQ8WTQ1 72 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 AGRNO00468 2067 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 ZFYVE26Q68DK2 2539 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 ASH1LQ9NR48 2969 aaKnown RBP5.12□□□□□ -1.59
RGPD1-201ENST00000398193 SPATA25Q9BR10 227 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 CELA1Q9UNI1 258 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 F8WDY8 70 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 TEX15Q9BXT5 2789 aa5.12□□□□□ -1.59
RGPD1-201ENST00000398193 TRBV20-1A0A075B6N2 111 aa5.11□□□□□ -1.59
RGPD1-201ENST00000398193 RNASE13Q5GAN3 156 aaKnown RBP5.11□□□□□ -1.59
RGPD1-201ENST00000398193 SPCS1Q9Y6A9 102 aa5.11□□□□□ -1.59
RGPD1-201ENST00000398193 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
RGPD1-201ENST00000398193 CSPG4Q6UVK1 2322 aa5.11□□□□□ -1.59
RGPD1-201ENST00000398193 TRAV13-1A0A0B4J241 112 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 IGHV3OR16-9A0A0B4J2B5 98 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 RBX1P62877 108 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 Q8IZM0 81 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 RAB37Q96AX2 223 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 CFC1BP0CG36 223 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 CFC1P0CG37 223 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 CD164L2Q6UWJ8 174 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 MUSTN1Q8IVN3 82 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 FLNAP21333 2647 aaKnown RBP5.1□□□□□ -1.59
RGPD1-201ENST00000398193 TRAV8-3A0A0A6YYJ7 113 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 F8W1H4 67 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 IBA57-AS1B1ANH7 110 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 COX17Q14061 63 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 IGLV4-60A0A075B6I1 120 aa5.1□□□□□ -1.59
RGPD1-201ENST00000398193 TSPAN13O95857 204 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms