RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SCGB1D4Q6XE38 83 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 Q8NAQ8 132 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 IGHV3-73A0A0B4J1V6 119 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 I3L3M4 83 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 DEFB4AO15263 64 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 RPL39P62891 51 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 SBSPONQ8IVN8 264 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 UBE2D1P51668 147 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 C20orf203Q8NBC4 194 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 NBEAL1Q6ZS30 2694 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 NBEAL2Q6ZNJ1 2754 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 TRGV2A0A075B6R0 118 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 RHODO00212 210 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 CRYBA4P53673 196 aa13.74□□□□□ -0.21
PDLIM2-204ENST00000397760 SRSF9Q13242 221 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDLIM2-204ENST00000397760 TRAV4A0A0B4J268 109 aa13.72□□□□□ -0.21
PDLIM2-204ENST00000397760 A0A0J9YY99 117 aa13.72□□□□□ -0.21
PDLIM2-204ENST00000397760 MRAPQ8TCY5 172 aa13.72□□□□□ -0.21
PDLIM2-204ENST00000397760 PYGO1Q9Y3Y4 419 aa13.72□□□□□ -0.21
PDLIM2-204ENST00000397760 LYRM9A8MSI8 78 aa13.71□□□□□ -0.21
PDLIM2-204ENST00000397760 IGHV3-53P01767 116 aa13.71□□□□□ -0.21
PDLIM2-204ENST00000397760 DEFB130BP0DP73 79 aa13.71□□□□□ -0.21
PDLIM2-204ENST00000397760 DEFB130AP0DP74 79 aa13.71□□□□□ -0.21
PDLIM2-204ENST00000397760 FAM222AQ5U5X8 452 aa13.71□□□□□ -0.21
PDLIM2-204ENST00000397760 P0DMU3 169 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 FAM231AP0DMU4 169 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 FAM231CP0DMU5 169 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 TMEM170BQ5T4T1 132 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 LINC00612Q8N6U2 182 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 ZNRF2Q8NHG8 242 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 PLEKHB2Q96CS7 222 aa13.71□□□□□ -0.22
PDLIM2-204ENST00000397760 SLC25A29Q8N8R3 303 aa13.7□□□□□ -0.22
PDLIM2-204ENST00000397760 LEPROTO15243 131 aa13.69□□□□□ -0.22
PDLIM2-204ENST00000397760 LYRM7Q5U5X0 104 aa13.69□□□□□ -0.22
PDLIM2-204ENST00000397760 J3QQQ9 107 aa13.69□□□□□ -0.22
PDLIM2-204ENST00000397760 Q6ZSN1 163 aa13.69□□□□□ -0.22
PDLIM2-204ENST00000397760 TMEM223A0PJW6 202 aa13.68□□□□□ -0.22
PDLIM2-204ENST00000397760 J3QR89 54 aa13.68□□□□□ -0.22
PDLIM2-204ENST00000397760 COTL1Q14019 142 aa13.68□□□□□ -0.22
PDLIM2-204ENST00000397760 SPATA25Q9BR10 227 aa13.68□□□□□ -0.22
PDLIM2-204ENST00000397760 SPART-AS1P0CW21 52 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 LGALS3P17931 250 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 AMELXQ99217 191 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 TM2D3Q9BRN9 247 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 PGPEP1Q9NXJ5 209 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 CIDEAO60543 219 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 C21orf62-AS1Q17RA5 79 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 VCX2Q9H322 139 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 CELA1Q9UNI1 258 aa13.67□□□□□ -0.22
PDLIM2-204ENST00000397760 IGLV4-3A0A075B6K6 122 aa13.66□□□□□ -0.22
PDLIM2-204ENST00000397760 RPL24P83731 157 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-204ENST00000397760 H3BMG7 143 aa13.65□□□□□ -0.22
PDLIM2-204ENST00000397760 IGHV3-30P01768 117 aa13.65□□□□□ -0.22
PDLIM2-204ENST00000397760 IGHV3-30-5P0DP03 117 aa13.65□□□□□ -0.22
PDLIM2-204ENST00000397760 TEX48A0A1B0GUV7 120 aa13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 TSPEAR-AS2P59090 65 aa13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 DAD1P61803 113 aa13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 PRO0461Q9UI25 63 aa13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 ZNF22P17026 224 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 DNAJC30Q96LL9 226 aa13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 C11orf68Q9H3H3 251 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-204ENST00000397760 TRGV4A0A0C4DH28 118 aa13.63□□□□□ -0.23
PDLIM2-204ENST00000397760 UBE2D3P61077 147 aa13.63□□□□□ -0.23
PDLIM2-204ENST00000397760 UBE2D2P62837 147 aa13.63□□□□□ -0.23
PDLIM2-204ENST00000397760 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
PDLIM2-204ENST00000397760 NACAE9PAV3 2078 aa13.63□□□□□ -0.23
PDLIM2-204ENST00000397760 FHL2Q14192 279 aa13.62□□□□□ -0.23
PDLIM2-204ENST00000397760 WFDC2Q14508 124 aa13.62□□□□□ -0.23
PDLIM2-204ENST00000397760 TSPAN13O95857 204 aa13.62□□□□□ -0.23
PDLIM2-204ENST00000397760 Q9UF83 564 aa13.62□□□□□ -0.23
PDLIM2-204ENST00000397760 A0A0J9YWU9 116 aa13.61□□□□□ -0.23
PDLIM2-204ENST00000397760 K7EQD1 137 aa13.61□□□□□ -0.23
PDLIM2-204ENST00000397760 MRPS36P82909 103 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-204ENST00000397760 DEFB104AQ8WTQ1 72 aa13.61□□□□□ -0.23
PDLIM2-204ENST00000397760 SPANXA1Q9NS26 97 aa13.61□□□□□ -0.23
PDLIM2-204ENST00000397760 TRBV20-1A0A075B6N2 111 aa13.6□□□□□ -0.23
PDLIM2-204ENST00000397760 OPRPNQ99935 248 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-204ENST00000397760 ATP6V0E2Q8NHE4 81 aa13.6□□□□□ -0.23
PDLIM2-204ENST00000397760 TRBV6-4A0A1B0GX49 114 aa13.59□□□□□ -0.23
PDLIM2-204ENST00000397760 C10orf126Q8N4M7 172 aa13.59□□□□□ -0.23
PDLIM2-204ENST00000397760 B9D2Q9BPU9 175 aa13.59□□□□□ -0.23
PDLIM2-204ENST00000397760 TRBV10-1A0A0K0K1A3 114 aa13.58□□□□□ -0.24
PDLIM2-204ENST00000397760 TMEM238C9JI98 176 aa13.58□□□□□ -0.24
PDLIM2-204ENST00000397760 ATP5G1P05496 136 aa13.58□□□□□ -0.24
PDLIM2-204ENST00000397760 CFC1BP0CG36 223 aa13.58□□□□□ -0.24
PDLIM2-204ENST00000397760 CFC1P0CG37 223 aa13.58□□□□□ -0.24
PDLIM2-204ENST00000397760 A0A0J9YXV3 536 aa13.57□□□□□ -0.24
PDLIM2-204ENST00000397760 PRO1854Q9UHT4 67 aa13.57□□□□□ -0.24
PDLIM2-204ENST00000397760 APOMO95445 188 aa13.57□□□□□ -0.24
PDLIM2-204ENST00000397760 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
PDLIM2-204ENST00000397760 FAM104AQ969W3 186 aa13.56□□□□□ -0.24
PDLIM2-204ENST00000397760 TINCRA0A1B0GVN0 87 aa13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 RPL36AP83881 106 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 ETDBQ3ZM63 59 aa13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 RPL36ALQ969Q0 106 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 CHCHD7Q9BUK0 85 aa13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 HUWE1Q7Z6Z7 4374 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-204ENST00000397760 PRO0255Q9UI72 69 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms