RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 Q6ZVQ6 151 aa7.85□□□□□ -1.15
COL4A4-201ENST00000396625 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
COL4A4-201ENST00000396625 PROK2Q9HC23 129 aa7.85□□□□□ -1.15
COL4A4-201ENST00000396625 TRBV10-1A0A0K0K1A3 114 aa7.85□□□□□ -1.15
COL4A4-201ENST00000396625 Q6Q795 121 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 IBA57-AS1B1ANH7 110 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 LINC00308Q8TCZ7 52 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 PRO0255Q9UI72 69 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 SERTAD4-AS1Q5TG53 156 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 ZNF706Q9Y5V0 76 aaPredicted RBP7.84□□□□□ -1.15
COL4A4-201ENST00000396625 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 MRPS12O15235 138 aaKnown RBP7.84□□□□□ -1.15
COL4A4-201ENST00000396625 IGFL3Q6UXB1 125 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 DHRS4-AS1Q9P1J3 65 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
COL4A4-201ENST00000396625 NEXN-AS1Q8NBZ9 246 aa7.84□□□□□ -1.16
COL4A4-201ENST00000396625 MTORP42345 2549 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 IGKV2-28A0A075B6P5 120 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 IGKV2D-28P01615 120 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 SMAD5-AS1Q9Y6J3 95 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 NCOR2Q9Y618 2525 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 C11orf45Q8TAV5 145 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 PSPHP1O15172 72 aa7.83□□□□□ -1.16
COL4A4-201ENST00000396625 TRBV7-6A0A0J9YX20 115 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 PATE2Q6UY27 113 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 DEFB1P60022 68 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 POM121L12Q8N7R1 296 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 CLUHP3Q96NS8 147 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 UBE2D2P62837 147 aa7.82□□□□□ -1.16
COL4A4-201ENST00000396625 PCSK5Q92824 1860 aa7.81□□□□□ -1.16
COL4A4-201ENST00000396625 XAGE1AQ9HD64 81 aa7.81□□□□□ -1.16
COL4A4-201ENST00000396625 TP73-AS1Q9UF72 201 aa7.81□□□□□ -1.16
COL4A4-201ENST00000396625 K7EMT4 169 aa7.81□□□□□ -1.16
COL4A4-201ENST00000396625 SOSTDC1Q6X4U4 206 aa7.81□□□□□ -1.16
COL4A4-201ENST00000396625 IL17DQ8TAD2 202 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 CDKN2A-AS1Q9UH64 79 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 X6R8D5 127 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 C19orf71A6NCJ1 209 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 IGLV3-1P01715 115 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 JMJD1CQ15652 2540 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 A0A0J9YX75 114 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 FAM215AQ9Y5M1 114 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 FRMD6-AS1P0C7T7 363 aa7.8□□□□□ -1.16
COL4A4-201ENST00000396625 SMIM9A6NGZ8 99 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 C11orf53Q8IXP5 236 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 ESRGQ1W209 222 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 SPRNQ5BIV9 151 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 NAV2Q8IVL1 2488 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 EBI3Q14213 229 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 A0A1B0GXF2 115 aa7.79□□□□□ -1.16
COL4A4-201ENST00000396625 COL27A1Q8IZC6 1860 aaPredicted RBP7.79□□□□□ -1.16
COL4A4-201ENST00000396625 USP9XQ93008 2570 aaPredicted RBP7.78□□□□□ -1.16
COL4A4-201ENST00000396625 J3QKU1 62 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 C6orf99Q4VX62 202 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 CELA1Q9UNI1 258 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
COL4A4-201ENST00000396625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.78□□□□□ -1.16
COL4A4-201ENST00000396625 PPDPFQ9H3Y8 114 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 PIEZO1Q92508 2521 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 MAP6D1Q9H9H5 199 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 DEFB113Q30KQ7 82 aa7.78□□□□□ -1.16
COL4A4-201ENST00000396625 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
COL4A4-201ENST00000396625 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
COL4A4-201ENST00000396625 Q6ZTI0 123 aa7.77□□□□□ -1.17
COL4A4-201ENST00000396625 UNQ9165/PRO28630Q6UXU0 137 aa7.77□□□□□ -1.17
COL4A4-201ENST00000396625 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
COL4A4-201ENST00000396625 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.76□□□□□ -1.17
COL4A4-201ENST00000396625 IGLV4-3A0A075B6K6 122 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 NANOS2P60321 138 aaKnown RBP7.76□□□□□ -1.17
COL4A4-201ENST00000396625 CSDC2Q9Y534 153 aaKnown RBP7.76□□□□□ -1.17
COL4A4-201ENST00000396625 LST1O00453 97 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
COL4A4-201ENST00000396625 Q6JHZ5 121 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 Q6ZQY7 126 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
COL4A4-201ENST00000396625 YPEL4Q96NS1 127 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
COL4A4-201ENST00000396625 INSL3P51460 131 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 PLA2G2EQ9NZK7 142 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 PLA2G2AP14555 144 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 COX17Q14061 63 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 XGP55808 180 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 LY6LH3BQJ8 138 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 CFAP126Q5VTH2 177 aa7.75□□□□□ -1.17
COL4A4-201ENST00000396625 DNAJC9-AS1A6NH13 148 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 A8MZ25 164 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 GDF5OSQ5U4N7 250 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 Q8N976 141 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 CRYGAP11844 174 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 MYCNOSP40205 109 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 ZNF524Q96C55 264 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 RPL37AP8A6NKH3 93 aa7.74□□□□□ -1.17
COL4A4-201ENST00000396625 MAPKAPK5-AS1Q8N8E1 139 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 TMEM89A2RUT3 159 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 SMIM11BQ8TCY0 68 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 LY6G6EA0A0G2JKS1 128 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms