RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CLEC2BQ92478 149 aa11.28□□□□□ -0.6
HOXA3-202ENST00000396352 IFITM1P13164 125 aa11.28□□□□□ -0.6
HOXA3-202ENST00000396352 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
HOXA3-202ENST00000396352 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
HOXA3-202ENST00000396352 MYO9AB2RTY4 2548 aa11.27□□□□□ -0.6
HOXA3-202ENST00000396352 CHD6Q8TD26 2715 aa11.27□□□□□ -0.6
HOXA3-202ENST00000396352 IGLV5-39A0A0G2JS06 123 aa11.27□□□□□ -0.61
HOXA3-202ENST00000396352 LINC00694P0DN24 101 aa11.27□□□□□ -0.61
HOXA3-202ENST00000396352 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
HOXA3-202ENST00000396352 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
HOXA3-202ENST00000396352 LINC00242Q5T6M2 205 aa11.27□□□□□ -0.61
HOXA3-202ENST00000396352 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
HOXA3-202ENST00000396352 ACACBO00763 2458 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 LST1O00453 97 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 C2orf82Q6UX34 121 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 COX6CP09669 75 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 CITED2Q99967 270 aaPredicted RBP11.26□□□□□ -0.61
HOXA3-202ENST00000396352 KRTAP10-9P60411 292 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 DGAT2L7PQ6IED9 249 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 FAM19A3Q7Z5A8 133 aa11.26□□□□□ -0.61
HOXA3-202ENST00000396352 H3BT86 120 aa11.25□□□□□ -0.61
HOXA3-202ENST00000396352 CRLF1O75462 422 aa11.25□□□□□ -0.61
HOXA3-202ENST00000396352 NDUFA7O95182 113 aa11.25□□□□□ -0.61
HOXA3-202ENST00000396352 UBR5O95071 2799 aaPredicted RBP11.25□□□□□ -0.61
HOXA3-202ENST00000396352 HERVK_113P63121 156 aa11.24□□□□□ -0.61
HOXA3-202ENST00000396352 LINC00308Q8TCZ7 52 aa11.24□□□□□ -0.61
HOXA3-202ENST00000396352 Q9H8V8 135 aa11.24□□□□□ -0.61
HOXA3-202ENST00000396352 TRGV1A0A0A0MS02 117 aa11.24□□□□□ -0.61
HOXA3-202ENST00000396352 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
HOXA3-202ENST00000396352 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
HOXA3-202ENST00000396352 TRAV8-4A0A0B4J246 113 aa11.23□□□□□ -0.61
HOXA3-202ENST00000396352 SMIM1B2RUZ4 78 aa11.23□□□□□ -0.61
HOXA3-202ENST00000396352 FAM208BQ5VWN6 2430 aa11.23□□□□□ -0.61
HOXA3-202ENST00000396352 LRRK2Q5S007 2527 aa11.23□□□□□ -0.61
HOXA3-202ENST00000396352 TRAV4A0A0B4J268 109 aa11.23□□□□□ -0.61
HOXA3-202ENST00000396352 PTPN13Q12923 2485 aa11.23□□□□□ -0.61
HOXA3-202ENST00000396352 CSDC2Q9Y534 153 aaKnown RBP11.22□□□□□ -0.61
HOXA3-202ENST00000396352 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
HOXA3-202ENST00000396352 STHQ8IWL8 128 aa11.22□□□□□ -0.61
HOXA3-202ENST00000396352 K7EQD1 137 aa11.21□□□□□ -0.61
HOXA3-202ENST00000396352 SNCGO76070 127 aa11.21□□□□□ -0.61
HOXA3-202ENST00000396352 Q6ZTI0 123 aa11.21□□□□□ -0.61
HOXA3-202ENST00000396352 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
HOXA3-202ENST00000396352 ABCA12Q86UK0 2595 aa11.21□□□□□ -0.61
HOXA3-202ENST00000396352 PRB1P04280 392 aa11.21□□□□□ -0.62
HOXA3-202ENST00000396352 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.62
HOXA3-202ENST00000396352 ANAPC13Q9BS18 74 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 TRBV10-1A0A0K0K1A3 114 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 DEFB113Q30KQ7 82 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 ZNF462Q96JM2 2506 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 F5H768 121 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 RPL36AP83881 106 aaKnown RBP11.2□□□□□ -0.62
HOXA3-202ENST00000396352 DEFB121Q5J5C9 76 aa11.2□□□□□ -0.62
HOXA3-202ENST00000396352 RPL36ALQ969Q0 106 aaKnown RBP11.2□□□□□ -0.62
HOXA3-202ENST00000396352 TRAV13-1A0A0B4J241 112 aa11.19□□□□□ -0.62
HOXA3-202ENST00000396352 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
HOXA3-202ENST00000396352 DAZ4Q86SG3 579 aaKnown RBP11.19□□□□□ -0.62
HOXA3-202ENST00000396352 DAZ3Q9NR90 486 aaKnown RBP11.19□□□□□ -0.62
HOXA3-202ENST00000396352 NAV2Q8IVL1 2488 aa11.19□□□□□ -0.62
HOXA3-202ENST00000396352 EPG5Q9HCE0 2579 aa11.19□□□□□ -0.62
HOXA3-202ENST00000396352 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
HOXA3-202ENST00000396352 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
HOXA3-202ENST00000396352 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
HOXA3-202ENST00000396352 Q96MF0 132 aa11.19□□□□□ -0.62
HOXA3-202ENST00000396352 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
HOXA3-202ENST00000396352 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
HOXA3-202ENST00000396352 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
HOXA3-202ENST00000396352 NF1P21359 2839 aa11.18□□□□□ -0.62
HOXA3-202ENST00000396352 NIPBLQ6KC79 2804 aaeCLIP11.18□□□□□ -0.62
HOXA3-202ENST00000396352 NBPF19A0A087WUL8 3843 aa11.17□□□□□ -0.62
HOXA3-202ENST00000396352 KRTAP1-3Q8IUG1 177 aa11.17□□□□□ -0.62
HOXA3-202ENST00000396352 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
HOXA3-202ENST00000396352 SETXQ7Z333 2677 aaKnown RBP11.17□□□□□ -0.62
HOXA3-202ENST00000396352 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
HOXA3-202ENST00000396352 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
HOXA3-202ENST00000396352 GAGE12JA6NER3 117 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 GAGE4Q13068 117 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 GAGE5Q13069 117 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 Q6Q795 121 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 PRIMA1Q86XR5 153 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
HOXA3-202ENST00000396352 FAM240AA0A1B0GVK7 77 aa11.15□□□□□ -0.62
HOXA3-202ENST00000396352 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.62
HOXA3-202ENST00000396352 TMEM86BQ8N661 226 aa11.15□□□□□ -0.62
HOXA3-202ENST00000396352 WNK1Q9H4A3 2382 aa11.15□□□□□ -0.62
HOXA3-202ENST00000396352 COX7A2LO14548 114 aa11.15□□□□□ -0.62
HOXA3-202ENST00000396352 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
HOXA3-202ENST00000396352 USP24Q9UPU5 2620 aa11.15□□□□□ -0.62
HOXA3-202ENST00000396352 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.63
HOXA3-202ENST00000396352 NOP10Q9NPE3 64 aaKnown RBP11.14□□□□□ -0.63
HOXA3-202ENST00000396352 APCP25054 2843 aa11.14□□□□□ -0.63
HOXA3-202ENST00000396352 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
HOXA3-202ENST00000396352 CCL24O00175 119 aa11.14□□□□□ -0.63
HOXA3-202ENST00000396352 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
HOXA3-202ENST00000396352 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
HOXA3-202ENST00000396352 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
HOXA3-202ENST00000396352 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms