RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PRSS2P07478 247 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 SNRPD3P62318 126 aaKnown RBP3.91□□□□□ -1.78
VPS41-203ENST00000395969 TMEM170BQ5T4T1 132 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 PRR9Q5T870 116 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 FAM19A3Q7Z5A8 133 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 C3orf22Q8N5N4 141 aa3.91□□□□□ -1.78
VPS41-203ENST00000395969 RPL39LQ96EH5 51 aaKnown RBP3.91□□□□□ -1.78
VPS41-203ENST00000395969 IGHV3-16A0A0C4DH30 117 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 A0A0U1RQV1 116 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 J3KT08 172 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 IGLV1-51P01701 117 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 C2orf82Q6UX34 121 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 LINC00612Q8N6U2 182 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 OR13C6PQ8NH95 151 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 ZNRF2Q8NHG8 242 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 TMEM141Q96I45 108 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 DPH3P1Q9H4G8 78 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 C19orf73Q9NVV2 129 aa3.9□□□□□ -1.78
VPS41-203ENST00000395969 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 UQCRQO14949 82 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3-23P01764 117 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 CIRBPQ14011 172 aaKnown RBP3.9□□□□□ -1.79
VPS41-203ENST00000395969 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 SDIM1Q6ZPB5 146 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 MUSTN1Q8IVN3 82 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 LINC01006Q8NI28 216 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 LINC00526Q96FQ7 95 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 TIMM17AQ99595 171 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 SPANXCQ9NY87 97 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 LEPROTO15243 131 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 ATP5G1P05496 136 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
VPS41-203ENST00000395969 LY6EQ16553 131 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 V9GYY9 64 aa3.9□□□□□ -1.79
VPS41-203ENST00000395969 COL12A1Q99715 3063 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3OR16-13A0A075B7E8 117 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3-74A0A0B4J1X5 117 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 SDHAF1A6NFY7 115 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 RNF182Q8N6D2 247 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 CYSTM1Q9H1C7 97 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 TRAV8-3A0A0A6YYJ7 113 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 TRBV27A0A0K0K1C4 114 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 ACYP1P07311 99 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 LGALS3P17931 250 aaKnown RBP3.89□□□□□ -1.79
VPS41-203ENST00000395969 CLEC2BQ92478 149 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 TP53TG1Q9Y2A0 90 aa3.89□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3OR16-10A0A075B7F0 116 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 TRAV13-1A0A0B4J241 112 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
VPS41-203ENST00000395969 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
VPS41-203ENST00000395969 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 WFDC9Q8NEX5 89 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 LITAFQ99732 161 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 OVOL2Q9BRP0 275 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 ICOSQ9Y6W8 199 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 LST1O00453 97 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 CRYGAP11844 174 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 RHOHQ15669 191 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 C2orf48Q96LS8 159 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 MAP6D1Q9H9H5 199 aa3.88□□□□□ -1.79
VPS41-203ENST00000395969 SONP18583 2426 aaKnown RBP3.87□□□□□ -1.79
VPS41-203ENST00000395969 LRBAP50851 2863 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3-66A0A0C4DH42 116 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
VPS41-203ENST00000395969 CXCL5P42830 114 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 DAZ2Q13117 558 aaKnown RBP3.87□□□□□ -1.79
VPS41-203ENST00000395969 C5orf38Q86SI9 138 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 LINC00482Q8N8I6 264 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 CSNK1G2-AS1Q8NCQ2 148 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 SMCR5Q8TEV8 140 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 VPS13CQ709C8 3753 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 SPTBN4Q9H254 2564 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 HIST1H4AP62805 103 aaKnown RBP3.87□□□□□ -1.79
VPS41-203ENST00000395969 RPL39P62891 51 aaKnown RBP3.87□□□□□ -1.79
VPS41-203ENST00000395969 TIMM21Q9BVV7 248 aa3.87□□□□□ -1.79
VPS41-203ENST00000395969 MGPP08493 103 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 COX7CP15954 63 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 RBMY1BA6NDE4 496 aaKnown RBP3.86□□□□□ -1.79
VPS41-203ENST00000395969 RBMY1EA6NEQ0 496 aaKnown RBP3.86□□□□□ -1.79
VPS41-203ENST00000395969 RBMY1DP0C7P1 496 aaKnown RBP3.86□□□□□ -1.79
VPS41-203ENST00000395969 C10orf99Q6UWK7 81 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 WNK1Q9H4A3 2382 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 LY6G6DO95868 133 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 COX6CP09669 75 aa3.86□□□□□ -1.79
VPS41-203ENST00000395969 DNAH3Q8TD57 4116 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 SYNJ2BPP57105 145 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 ODF3L2Q3SX64 289 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 PHLDA3Q9Y5J5 127 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 USP9XQ93008 2570 aaPredicted RBP3.85□□□□□ -1.79
VPS41-203ENST00000395969 I3L3M4 83 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 M0QY20 66 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 OXTP01178 125 aa3.85□□□□□ -1.79
VPS41-203ENST00000395969 GIG44P09565 113 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms