RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
STRADB-202ENST00000392249 LOC100131303A0A0U1RQF7 123 aa13.17□□□□□ -0.3
STRADB-202ENST00000392249 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
STRADB-202ENST00000392249 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
STRADB-202ENST00000392249 TRGV4A0A0C4DH28 118 aa13.16□□□□□ -0.3
STRADB-202ENST00000392249 LINC00694P0DN24 101 aa13.16□□□□□ -0.3
STRADB-202ENST00000392249 A0A1W2PPM0 123 aa13.15□□□□□ -0.3
STRADB-202ENST00000392249 C12orf74Q32Q52 190 aa13.15□□□□□ -0.3
STRADB-202ENST00000392249 TINCRA0A1B0GVN0 87 aa13.14□□□□□ -0.31
STRADB-202ENST00000392249 TRBV6-4A0A1B0GX49 114 aa13.14□□□□□ -0.31
STRADB-202ENST00000392249 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
STRADB-202ENST00000392249 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
STRADB-202ENST00000392249 TIMM21Q9BVV7 248 aa13.14□□□□□ -0.31
STRADB-202ENST00000392249 TRAV8-3A0A0A6YYJ7 113 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 CIDEAO60543 219 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 UBE2D1P51668 147 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 FHL2Q14192 279 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 X6R8D5 127 aa13.13□□□□□ -0.31
STRADB-202ENST00000392249 OR5A1Q8NGJ0 315 aa13.11□□□□□ -0.31
STRADB-202ENST00000392249 GEMIN7Q9H840 131 aaKnown RBP13.11□□□□□ -0.31
STRADB-202ENST00000392249 FABP2P12104 132 aa13.11□□□□□ -0.31
STRADB-202ENST00000392249 GTF2H5Q6ZYL4 71 aa13.11□□□□□ -0.31
STRADB-202ENST00000392249 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
STRADB-202ENST00000392249 K7EP34 96 aa13.1□□□□□ -0.31
STRADB-202ENST00000392249 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
STRADB-202ENST00000392249 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
STRADB-202ENST00000392249 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
STRADB-202ENST00000392249 SPCS1Q9Y6A9 102 aa13.1□□□□□ -0.31
STRADB-202ENST00000392249 IGHV1-58A0A0C4DH39 117 aa13.09□□□□□ -0.31
STRADB-202ENST00000392249 IGLL5B9A064 214 aa13.09□□□□□ -0.31
STRADB-202ENST00000392249 KIR2DL5BQ8NHK3 375 aa13.09□□□□□ -0.31
STRADB-202ENST00000392249 GTSF1LQ9H1H1 148 aa13.09□□□□□ -0.31
STRADB-202ENST00000392249 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.31
STRADB-202ENST00000392249 A6NJY4 79 aa13.08□□□□□ -0.31
STRADB-202ENST00000392249 DEFB135Q30KP9 77 aa13.08□□□□□ -0.31
STRADB-202ENST00000392249 C10orf126Q8N4M7 172 aa13.08□□□□□ -0.31
STRADB-202ENST00000392249 TMEM243Q9BU79 118 aa13.08□□□□□ -0.31
STRADB-202ENST00000392249 A8MZ25 164 aa13.08□□□□□ -0.32
STRADB-202ENST00000392249 UBE2L6O14933 153 aa13.08□□□□□ -0.32
STRADB-202ENST00000392249 IGHV3-30P01768 117 aa13.08□□□□□ -0.32
STRADB-202ENST00000392249 IGHV3-30-5P0DP03 117 aa13.08□□□□□ -0.32
STRADB-202ENST00000392249 CDKN2A-AS1Q9UH64 79 aa13.08□□□□□ -0.32
STRADB-202ENST00000392249 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
STRADB-202ENST00000392249 VSIG2Q96IQ7 327 aa13.07□□□□□ -0.32
STRADB-202ENST00000392249 SMIM9A6NGZ8 99 aa13.07□□□□□ -0.32
STRADB-202ENST00000392249 LINC00612Q8N6U2 182 aa13.07□□□□□ -0.32
STRADB-202ENST00000392249 COX6A2Q02221 97 aa13.06□□□□□ -0.32
STRADB-202ENST00000392249 TRAV13-1A0A0B4J241 112 aa13.05□□□□□ -0.32
STRADB-202ENST00000392249 TIRAPP58753 221 aa13.05□□□□□ -0.32
STRADB-202ENST00000392249 LINC00242Q5T6M2 205 aa13.05□□□□□ -0.32
STRADB-202ENST00000392249 CDC42SE2Q9NRR3 84 aa13.05□□□□□ -0.32
STRADB-202ENST00000392249 A0A0J9YXY3 114 aa13.05□□□□□ -0.32
STRADB-202ENST00000392249 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
STRADB-202ENST00000392249 IGLV5-45A0A087WSX0 123 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 APOC4P55056 127 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 DEFB4AO15263 64 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 APOMO95445 188 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 SMAGPQ0VAQ4 97 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 NDUFA12Q9UI09 145 aa13.04□□□□□ -0.32
STRADB-202ENST00000392249 TMEM101Q96IK0 257 aa13.03□□□□□ -0.32
STRADB-202ENST00000392249 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
STRADB-202ENST00000392249 HERVK_113P63121 156 aa13.03□□□□□ -0.32
STRADB-202ENST00000392249 TRBV6-8A0A0A6YYG3 113 aa13.02□□□□□ -0.33
STRADB-202ENST00000392249 TMEM238C9JI98 176 aa13.02□□□□□ -0.33
STRADB-202ENST00000392249 GAGE6Q13070 117 aa13.02□□□□□ -0.33
STRADB-202ENST00000392249 GYPEP15421 78 aa13.01□□□□□ -0.33
STRADB-202ENST00000392249 FAM19A3Q7Z5A8 133 aa13□□□□□ -0.33
STRADB-202ENST00000392249 H7C423 109 aa13□□□□□ -0.33
STRADB-202ENST00000392249 ZFAND6Q6FIF0 208 aa13□□□□□ -0.33
STRADB-202ENST00000392249 CHCHD5Q9BSY4 110 aa13□□□□□ -0.33
STRADB-202ENST00000392249 IGHV4-28A0A0C4DH34 117 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 LYRM9A8MSI8 78 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 WIPF1O43516 503 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 CFC1P0CG37 223 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 MUSTN1Q8IVN3 82 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 LITAFQ99732 161 aa12.99□□□□□ -0.33
STRADB-202ENST00000392249 A4D1N5 150 aa12.98□□□□□ -0.33
STRADB-202ENST00000392249 IGHV4-30-4P0DP06 118 aa12.98□□□□□ -0.33
STRADB-202ENST00000392249 PRO0255Q9UI72 69 aa12.98□□□□□ -0.33
STRADB-202ENST00000392249 TSPAN13O95857 204 aa12.97□□□□□ -0.33
STRADB-202ENST00000392249 IGLV4-60A0A075B6I1 120 aa12.97□□□□□ -0.33
STRADB-202ENST00000392249 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
STRADB-202ENST00000392249 ATP6V0E2Q8NHE4 81 aa12.97□□□□□ -0.33
STRADB-202ENST00000392249 IGLV5-39A0A0G2JS06 123 aa12.96□□□□□ -0.33
STRADB-202ENST00000392249 SMIM1B2RUZ4 78 aa12.96□□□□□ -0.33
STRADB-202ENST00000392249 KRTAP24-1Q3LI83 254 aa12.96□□□□□ -0.33
STRADB-202ENST00000392249 ADAMTSL4-AS1Q5T5F5 129 aa12.96□□□□□ -0.33
STRADB-202ENST00000392249 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.34
STRADB-202ENST00000392249 RPL24P83731 157 aaKnown RBP12.96□□□□□ -0.34
STRADB-202ENST00000392249 A0A096LPF7 62 aa12.95□□□□□ -0.34
STRADB-202ENST00000392249 Q8NAQ8 132 aa12.95□□□□□ -0.34
STRADB-202ENST00000392249 FBN1P35555 2871 aaKnown RBP12.94□□□□□ -0.34
STRADB-202ENST00000392249 NDUFA1O15239 70 aa12.94□□□□□ -0.34
STRADB-202ENST00000392249 PRSS2P07478 247 aa12.94□□□□□ -0.34
STRADB-202ENST00000392249 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms