RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TM2D2Q9BX73 214 aa12.91□□□□□ -0.34
ACTN4-202ENST00000390009 G3V4G9 280 aa12.91□□□□□ -0.34
ACTN4-202ENST00000390009 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
ACTN4-202ENST00000390009 NTM-AS1Q6ZSK4 140 aa12.91□□□□□ -0.34
ACTN4-202ENST00000390009 TRRAPQ9Y4A5 3859 aa12.9□□□□□ -0.34
ACTN4-202ENST00000390009 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
ACTN4-202ENST00000390009 HIST1H4GQ99525 98 aa12.9□□□□□ -0.34
ACTN4-202ENST00000390009 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 FHL2Q14192 279 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 SCGB1D4Q6XE38 83 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 RAB37Q96AX2 223 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 PLEKHB2Q96CS7 222 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
ACTN4-202ENST00000390009 A0A1W2PPM0 123 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 J3QQQ9 107 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 DEFB130BP0DP73 79 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 DEFB130AP0DP74 79 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 DGAT2L7PQ6IED9 249 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 LINC00694P0DN24 101 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 LINC00612Q8N6U2 182 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 OR5A1Q8NGJ0 315 aa12.88□□□□□ -0.35
ACTN4-202ENST00000390009 TMEM238C9JI98 176 aa12.87□□□□□ -0.35
ACTN4-202ENST00000390009 LEPROTO15243 131 aa12.87□□□□□ -0.35
ACTN4-202ENST00000390009 WIPF1O43516 503 aa12.87□□□□□ -0.35
ACTN4-202ENST00000390009 APOC4P55056 127 aa12.87□□□□□ -0.35
ACTN4-202ENST00000390009 SPCS1Q9Y6A9 102 aa12.87□□□□□ -0.35
ACTN4-202ENST00000390009 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
ACTN4-202ENST00000390009 DEFB135Q30KP9 77 aa12.86□□□□□ -0.35
ACTN4-202ENST00000390009 SBSPONQ8IVN8 264 aa12.86□□□□□ -0.35
ACTN4-202ENST00000390009 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
ACTN4-202ENST00000390009 TINCRA0A1B0GVN0 87 aa12.86□□□□□ -0.35
ACTN4-202ENST00000390009 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
ACTN4-202ENST00000390009 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
ACTN4-202ENST00000390009 UBE2D1P51668 147 aa12.85□□□□□ -0.35
ACTN4-202ENST00000390009 KRTAP24-1Q3LI83 254 aa12.85□□□□□ -0.35
ACTN4-202ENST00000390009 NHP2Q9NX24 153 aaKnown RBP12.85□□□□□ -0.35
ACTN4-202ENST00000390009 A0A0J9YY99 117 aa12.84□□□□□ -0.35
ACTN4-202ENST00000390009 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
ACTN4-202ENST00000390009 NBEAL2Q6ZNJ1 2754 aa12.84□□□□□ -0.35
ACTN4-202ENST00000390009 FABP2P12104 132 aa12.83□□□□□ -0.35
ACTN4-202ENST00000390009 K7ERJ3 54 aa12.83□□□□□ -0.36
ACTN4-202ENST00000390009 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
ACTN4-202ENST00000390009 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
ACTN4-202ENST00000390009 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
ACTN4-202ENST00000390009 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
ACTN4-202ENST00000390009 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
ACTN4-202ENST00000390009 GEMIN7Q9H840 131 aaKnown RBP12.82□□□□□ -0.36
ACTN4-202ENST00000390009 UBE2L6O14933 153 aa12.81□□□□□ -0.36
ACTN4-202ENST00000390009 SMAGPQ0VAQ4 97 aa12.81□□□□□ -0.36
ACTN4-202ENST00000390009 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
ACTN4-202ENST00000390009 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
ACTN4-202ENST00000390009 LYRM9A8MSI8 78 aa12.8□□□□□ -0.36
ACTN4-202ENST00000390009 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
ACTN4-202ENST00000390009 TIRAPP58753 221 aa12.79□□□□□ -0.36
ACTN4-202ENST00000390009 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
ACTN4-202ENST00000390009 DEFB4AO15263 64 aa12.79□□□□□ -0.36
ACTN4-202ENST00000390009 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
ACTN4-202ENST00000390009 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-202ENST00000390009 IGHV4-28A0A0C4DH34 117 aa12.78□□□□□ -0.36
ACTN4-202ENST00000390009 H7C423 109 aa12.78□□□□□ -0.36
ACTN4-202ENST00000390009 SPINK8P0C7L1 97 aa12.78□□□□□ -0.36
ACTN4-202ENST00000390009 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
ACTN4-202ENST00000390009 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.36
ACTN4-202ENST00000390009 TRBV6-8A0A0A6YYG3 113 aa12.77□□□□□ -0.36
ACTN4-202ENST00000390009 VSIG2Q96IQ7 327 aa12.77□□□□□ -0.36
ACTN4-202ENST00000390009 COX6A2Q02221 97 aa12.77□□□□□ -0.37
ACTN4-202ENST00000390009 OXLD1Q5BKU9 147 aa12.77□□□□□ -0.37
ACTN4-202ENST00000390009 LINC00242Q5T6M2 205 aa12.77□□□□□ -0.37
ACTN4-202ENST00000390009 TMEM101Q96IK0 257 aa12.77□□□□□ -0.37
ACTN4-202ENST00000390009 A0A1B0GWB2 263 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 GYPEP15421 78 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 HERVK_113P63121 156 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 TRAV13-1A0A0B4J241 112 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 Q8NAQ8 132 aa12.76□□□□□ -0.37
ACTN4-202ENST00000390009 TMEM238LA0A1B0GVL6 79 aa12.75□□□□□ -0.37
ACTN4-202ENST00000390009 A6NJY4 79 aa12.75□□□□□ -0.37
ACTN4-202ENST00000390009 MIFP14174 115 aa12.75□□□□□ -0.37
ACTN4-202ENST00000390009 RPL24P83731 157 aaKnown RBP12.75□□□□□ -0.37
ACTN4-202ENST00000390009 IGHV3-30P01768 117 aa12.74□□□□□ -0.37
ACTN4-202ENST00000390009 IGHV3-30-5P0DP03 117 aa12.74□□□□□ -0.37
ACTN4-202ENST00000390009 GAGE6Q13070 117 aa12.74□□□□□ -0.37
ACTN4-202ENST00000390009 RNF183Q96D59 192 aa12.74□□□□□ -0.37
ACTN4-202ENST00000390009 A8MZ25 164 aa12.74□□□□□ -0.37
ACTN4-202ENST00000390009 FBN1P35555 2871 aaKnown RBP12.73□□□□□ -0.37
ACTN4-202ENST00000390009 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
ACTN4-202ENST00000390009 ATP6V0E2Q8NHE4 81 aa12.73□□□□□ -0.37
ACTN4-202ENST00000390009 CHCHD5Q9BSY4 110 aa12.73□□□□□ -0.37
ACTN4-202ENST00000390009 NDUFA12Q9UI09 145 aa12.73□□□□□ -0.37
ACTN4-202ENST00000390009 IGLL5B9A064 214 aa12.72□□□□□ -0.37
ACTN4-202ENST00000390009 DAD1P61803 113 aa12.72□□□□□ -0.37
ACTN4-202ENST00000390009 CELA1Q9UNI1 258 aa12.72□□□□□ -0.37
ACTN4-202ENST00000390009 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
ACTN4-202ENST00000390009 SHISA2Q6UWI4 295 aa12.71□□□□□ -0.37
ACTN4-202ENST00000390009 BAHCC1Q9P281 2608 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms