RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
GPNMB-202ENST00000381990 C15orf53Q8NAA6 179 aa6.55□□□□□ -1.36
GPNMB-202ENST00000381990 IGHV1-58A0A0C4DH39 117 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
GPNMB-202ENST00000381990 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 OPRPNQ99935 248 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-202ENST00000381990 MTORP42345 2549 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 H7C423 109 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 MIAQ16674 131 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
GPNMB-202ENST00000381990 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 TIMM17BO60830 172 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 IGHV1OR15-1A0A075B7D0 117 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 LST1O00453 97 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 PRSS2P07478 247 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 CD28P10747 220 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 SPXQ9BT56 116 aa6.53□□□□□ -1.36
GPNMB-202ENST00000381990 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 C16orf95Q9H693 158 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 NDUFA12Q9UI09 145 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 TRGV11A0A075B6L2 103 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 TRBV7-7A0A0K0K1E9 115 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 ACYP1P07311 99 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 FAM110AQ9BQ89 295 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 NF1P21359 2839 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 HIVEP2P31629 2446 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
GPNMB-202ENST00000381990 NOTCH2Q04721 2471 aa6.51□□□□□ -1.37
GPNMB-202ENST00000381990 SORL1Q92673 2214 aa6.51□□□□□ -1.37
GPNMB-202ENST00000381990 HILS1P60008 231 aa6.51□□□□□ -1.37
GPNMB-202ENST00000381990 LINC01006Q8NI28 216 aa6.51□□□□□ -1.37
GPNMB-202ENST00000381990 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
GPNMB-202ENST00000381990 AKAP9Q99996 3911 aa6.5□□□□□ -1.37
GPNMB-202ENST00000381990 PIK3CD-AS1Q5SR53 167 aa6.5□□□□□ -1.37
GPNMB-202ENST00000381990 DYNLRB2Q8TF09 96 aa6.5□□□□□ -1.37
GPNMB-202ENST00000381990 COPS9Q8WXC6 57 aa6.5□□□□□ -1.37
GPNMB-202ENST00000381990 SMR3AQ99954 134 aa6.5□□□□□ -1.37
GPNMB-202ENST00000381990 LY6G6DO95868 133 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 HIST2H2BDQ6DRA6 164 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 C11orf44Q8N8P7 122 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 FAM104AQ969W3 186 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 TRAV12-2A0A075B6T6 113 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 ADARB2-AS1A8MUL3 147 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 CCL24O00175 119 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 DEFB114Q30KQ6 69 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 TMEM126AQ9H061 195 aa6.49□□□□□ -1.37
GPNMB-202ENST00000381990 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
GPNMB-202ENST00000381990 NDUFA7O95182 113 aa6.48□□□□□ -1.37
GPNMB-202ENST00000381990 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
GPNMB-202ENST00000381990 CIRBPQ14011 172 aaKnown RBP6.48□□□□□ -1.37
GPNMB-202ENST00000381990 CITED2Q99967 270 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-202ENST00000381990 TNFRSF18Q9Y5U5 241 aa6.48□□□□□ -1.37
GPNMB-202ENST00000381990 SETD2Q9BYW2 2564 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-202ENST00000381990 DEFB131AP59861 70 aa6.48□□□□□ -1.37
GPNMB-202ENST00000381990 MEIG1Q5JSS6 88 aa6.48□□□□□ -1.37
GPNMB-202ENST00000381990 ANK3Q12955 4377 aaKnown RBP6.48□□□□□ -1.37
GPNMB-202ENST00000381990 NDUFA1O15239 70 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 SPINK13Q1W4C9 94 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 CLEC2BQ92478 149 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 UBE2D4Q9Y2X8 147 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 WNK1Q9H4A3 2382 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 TRAV25A0A0B4J276 109 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 A8MTW9 85 aa6.47□□□□□ -1.37
GPNMB-202ENST00000381990 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.37
GPNMB-202ENST00000381990 TIRAPP58753 221 aa6.46□□□□□ -1.37
GPNMB-202ENST00000381990 KNCNA6PVL3 124 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 ATP5G1P05496 136 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 MAP6D1Q9H9H5 199 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 COX7A2LO14548 114 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 DNAJC30Q96LL9 226 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
GPNMB-202ENST00000381990 PROK1P58294 105 aa6.45□□□□□ -1.38
GPNMB-202ENST00000381990 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
GPNMB-202ENST00000381990 OTOGQ6ZRI0 2925 aa6.45□□□□□ -1.38
GPNMB-202ENST00000381990 LINC00643Q86TS7 51 aa6.45□□□□□ -1.38
GPNMB-202ENST00000381990 CEMP1Q6PRD7 247 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-202ENST00000381990 TRACP01848 142 aa6.44□□□□□ -1.38
GPNMB-202ENST00000381990 NPC2P61916 151 aa6.44□□□□□ -1.38
GPNMB-202ENST00000381990 CHCHD5Q9BSY4 110 aa6.44□□□□□ -1.38
GPNMB-202ENST00000381990 RBMY1BA6NDE4 496 aaKnown RBP6.43□□□□□ -1.38
GPNMB-202ENST00000381990 RBMY1EA6NEQ0 496 aaKnown RBP6.43□□□□□ -1.38
GPNMB-202ENST00000381990 RBMY1DP0C7P1 496 aaKnown RBP6.43□□□□□ -1.38
GPNMB-202ENST00000381990 HERVK_113P63121 156 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 HERV-K104P63124 156 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 SDIM1Q6ZPB5 146 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 LINC00308Q8TCZ7 52 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 SETXQ7Z333 2677 aaKnown RBP6.43□□□□□ -1.38
GPNMB-202ENST00000381990 IGLV5-39A0A0G2JS06 123 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
GPNMB-202ENST00000381990 SHISA2Q6UWI4 295 aa6.43□□□□□ -1.38
GPNMB-202ENST00000381990 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms