RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 Q6ZTI0 123 aa10.45□□□□□ -0.74
SNPH-201ENST00000381867 V9GYY9 64 aa10.44□□□□□ -0.74
SNPH-201ENST00000381867 LINC00269Q8N2A0 174 aa10.44□□□□□ -0.74
SNPH-201ENST00000381867 CACNA1AO00555 2505 aa10.44□□□□□ -0.74
SNPH-201ENST00000381867 USP17L23D6RBM5 183 aa10.44□□□□□ -0.74
SNPH-201ENST00000381867 PCNX3Q9H6A9 2034 aa10.44□□□□□ -0.74
SNPH-201ENST00000381867 TIMM17BO60830 172 aa10.43□□□□□ -0.74
SNPH-201ENST00000381867 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
SNPH-201ENST00000381867 M0QY20 66 aa10.42□□□□□ -0.74
SNPH-201ENST00000381867 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
SNPH-201ENST00000381867 FAM222AQ5U5X8 452 aa10.42□□□□□ -0.74
SNPH-201ENST00000381867 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
SNPH-201ENST00000381867 K7EQG2 157 aa10.42□□□□□ -0.74
SNPH-201ENST00000381867 CCDC179H3BU77 68 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 DSCAMO60469 2012 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 SPG11Q96JI7 2443 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 COX7CP15954 63 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 LST1O00453 97 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 XGP55808 180 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
SNPH-201ENST00000381867 SHISA2Q6UWI4 295 aa10.4□□□□□ -0.74
SNPH-201ENST00000381867 Q8N6K4 173 aa10.4□□□□□ -0.74
SNPH-201ENST00000381867 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.74
SNPH-201ENST00000381867 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.74
SNPH-201ENST00000381867 LINC01548A6NM66 108 aa10.4□□□□□ -0.75
SNPH-201ENST00000381867 PSMG3-AS1Q96PY0 264 aa10.4□□□□□ -0.75
SNPH-201ENST00000381867 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
SNPH-201ENST00000381867 NCOR2Q9Y618 2525 aa10.39□□□□□ -0.75
SNPH-201ENST00000381867 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
SNPH-201ENST00000381867 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
SNPH-201ENST00000381867 C6orf99Q4VX62 202 aa10.38□□□□□ -0.75
SNPH-201ENST00000381867 HILS1P60008 231 aa10.38□□□□□ -0.75
SNPH-201ENST00000381867 NRACQ8N912 160 aa10.38□□□□□ -0.75
SNPH-201ENST00000381867 CASC2Q6XLA1 102 aa10.38□□□□□ -0.75
SNPH-201ENST00000381867 CCKP06307 115 aa10.37□□□□□ -0.75
SNPH-201ENST00000381867 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
SNPH-201ENST00000381867 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
SNPH-201ENST00000381867 TNCP24821 2201 aa10.37□□□□□ -0.75
SNPH-201ENST00000381867 Q6ZSV7 163 aa10.37□□□□□ -0.75
SNPH-201ENST00000381867 FAM19A3Q7Z5A8 133 aa10.37□□□□□ -0.75
SNPH-201ENST00000381867 SNURFQ9Y675 71 aa10.36□□□□□ -0.75
SNPH-201ENST00000381867 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
SNPH-201ENST00000381867 IGKV2-24A0A0C4DH68 120 aa10.36□□□□□ -0.75
SNPH-201ENST00000381867 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SNPH-201ENST00000381867 LY6G6DO95868 133 aa10.36□□□□□ -0.75
SNPH-201ENST00000381867 Q6Q795 121 aa10.35□□□□□ -0.75
SNPH-201ENST00000381867 SONP18583 2426 aaKnown RBP10.35□□□□□ -0.75
SNPH-201ENST00000381867 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
SNPH-201ENST00000381867 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
SNPH-201ENST00000381867 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
SNPH-201ENST00000381867 TSHBP01222 138 aa10.35□□□□□ -0.75
SNPH-201ENST00000381867 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
SNPH-201ENST00000381867 WFDC10BQ8IUB3 73 aa10.34□□□□□ -0.75
SNPH-201ENST00000381867 DEFB131BA0A096LNP1 70 aa10.34□□□□□ -0.75
SNPH-201ENST00000381867 CDSNQ15517 529 aa10.34□□□□□ -0.75
SNPH-201ENST00000381867 PRR15LQ9BU68 103 aa10.34□□□□□ -0.75
SNPH-201ENST00000381867 EML5Q05BV3 1969 aa10.34□□□□□ -0.75
SNPH-201ENST00000381867 A8MZ25 164 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 Q6JHZ5 121 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 TRBV6-4A0A1B0GX49 114 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 IGF2RP11717 2491 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 C1orf158Q8N1D5 194 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 ZNF702PQ9H963 129 aa10.33□□□□□ -0.76
SNPH-201ENST00000381867 XAGE1AQ9HD64 81 aa10.32□□□□□ -0.76
SNPH-201ENST00000381867 Q6ZS46 218 aa10.32□□□□□ -0.76
SNPH-201ENST00000381867 C3orf84H3BNL1 204 aa10.32□□□□□ -0.76
SNPH-201ENST00000381867 K7ERS5 55 aa10.32□□□□□ -0.76
SNPH-201ENST00000381867 PROK1P58294 105 aa10.32□□□□□ -0.76
SNPH-201ENST00000381867 A0A096LNI7 61 aa10.31□□□□□ -0.76
SNPH-201ENST00000381867 Q6ZQY7 126 aa10.31□□□□□ -0.76
SNPH-201ENST00000381867 ZNF580Q9UK33 172 aa10.31□□□□□ -0.76
SNPH-201ENST00000381867 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
SNPH-201ENST00000381867 KIR2DL5BQ8NHK3 375 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 DCANP1Q8TF63 244 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 LINC00482Q8N8I6 264 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 C1orf195Q5TG92 126 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 SMIM11BQ8TCY0 68 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 CRYGDP07320 174 aa10.3□□□□□ -0.76
SNPH-201ENST00000381867 A6NED7 52 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
SNPH-201ENST00000381867 MRPS36P82909 103 aaKnown RBP10.29□□□□□ -0.76
SNPH-201ENST00000381867 Q8N976 141 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 UBE2D4Q9Y2X8 147 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 LINC00310P59036 64 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 CLUHP3Q96NS8 147 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 SMIM26A0A096LP01 95 aa10.29□□□□□ -0.76
SNPH-201ENST00000381867 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
SNPH-201ENST00000381867 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
SNPH-201ENST00000381867 EXPH5Q8NEV8 1989 aa10.28□□□□□ -0.76
SNPH-201ENST00000381867 CRIP2P52943 208 aaPredicted RBP10.27□□□□□ -0.76
SNPH-201ENST00000381867 ATG2AQ2TAZ0 1938 aa10.27□□□□□ -0.76
SNPH-201ENST00000381867 UBE2D1P51668 147 aa10.27□□□□□ -0.77
SNPH-201ENST00000381867 SYCNQ0VAF6 134 aa10.27□□□□□ -0.77
SNPH-201ENST00000381867 PRR9Q5T870 116 aa10.27□□□□□ -0.77
SNPH-201ENST00000381867 BRI3O95415 125 aa10.26□□□□□ -0.77
SNPH-201ENST00000381867 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
SNPH-201ENST00000381867 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms