RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
SGCB-201ENST00000381431 NCR3O14931 201 aa12.73□□□□□ -0.37
SGCB-201ENST00000381431 ACYP1P07311 99 aa12.73□□□□□ -0.37
SGCB-201ENST00000381431 CITED1Q99966 193 aa12.73□□□□□ -0.37
SGCB-201ENST00000381431 EDN2P20800 178 aa12.72□□□□□ -0.37
SGCB-201ENST00000381431 CFAP126Q5VTH2 177 aa12.72□□□□□ -0.37
SGCB-201ENST00000381431 CDK2AP2O75956 126 aa12.72□□□□□ -0.37
SGCB-201ENST00000381431 TEX49A0A1B0GTD5 131 aa12.71□□□□□ -0.37
SGCB-201ENST00000381431 TMEM223A0PJW6 202 aa12.71□□□□□ -0.37
SGCB-201ENST00000381431 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.37
SGCB-201ENST00000381431 hADV29S1A0JD25 119 aa12.71□□□□□ -0.37
SGCB-201ENST00000381431 KLLNB2CW77 178 aa12.71□□□□□ -0.37
SGCB-201ENST00000381431 SPANXB1Q9NS25 103 aaPredicted RBP12.71□□□□□ -0.38
SGCB-201ENST00000381431 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
SGCB-201ENST00000381431 F8W735 103 aaPredicted RBP12.7□□□□□ -0.38
SGCB-201ENST00000381431 PIK3CD-AS1Q5SR53 167 aa12.7□□□□□ -0.38
SGCB-201ENST00000381431 FAM222AQ5U5X8 452 aa12.7□□□□□ -0.38
SGCB-201ENST00000381431 CRYGDP07320 174 aa12.7□□□□□ -0.38
SGCB-201ENST00000381431 RBMY1FQ15415 496 aaKnown RBP12.7□□□□□ -0.38
SGCB-201ENST00000381431 RMI2Q96E14 147 aa12.7□□□□□ -0.38
SGCB-201ENST00000381431 TRACP01848 142 aa12.7□□□□□ -0.38
SGCB-201ENST00000381431 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 IGHV4-28A0A0C4DH34 117 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 RBX1P62877 108 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 FREM2Q5SZK8 3169 aa12.69□□□□□ -0.38
SGCB-201ENST00000381431 TET2Q6N021 2002 aaPredicted RBP12.68□□□□□ -0.38
SGCB-201ENST00000381431 UBE2BP63146 152 aa12.68□□□□□ -0.38
SGCB-201ENST00000381431 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
SGCB-201ENST00000381431 HTTP42858 3142 aa12.68□□□□□ -0.38
SGCB-201ENST00000381431 EXPH5Q8NEV8 1989 aa12.68□□□□□ -0.38
SGCB-201ENST00000381431 MT-ATP8P03928 68 aa12.68□□□□□ -0.38
SGCB-201ENST00000381431 TRBV6-5A0A0K0K1A5 114 aa12.68□□□□□ -0.38
SGCB-201ENST00000381431 NDUFA1O15239 70 aa12.68□□□□□ -0.38
SGCB-201ENST00000381431 SPEGQ15772 3267 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 AGRNO00468 2067 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 TSHBP01222 138 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 LINC00482Q8N8I6 264 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 A0A1B0GX51 115 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 IGLV1-40P01703 118 aa12.67□□□□□ -0.38
SGCB-201ENST00000381431 C14orf132Q9NPU4 83 aa12.66□□□□□ -0.38
SGCB-201ENST00000381431 DNAH14Q0VDD8 3507 aa12.66□□□□□ -0.38
SGCB-201ENST00000381431 TRIAP1O43715 76 aa12.66□□□□□ -0.38
SGCB-201ENST00000381431 SPANXCQ9NY87 97 aa12.66□□□□□ -0.38
SGCB-201ENST00000381431 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
SGCB-201ENST00000381431 SMIM20Q8N5G0 67 aa12.65□□□□□ -0.38
SGCB-201ENST00000381431 LINC00308Q8TCZ7 52 aa12.65□□□□□ -0.38
SGCB-201ENST00000381431 ZMAT4Q9H898 229 aa12.65□□□□□ -0.38
SGCB-201ENST00000381431 CCL18P55774 89 aa12.64□□□□□ -0.39
SGCB-201ENST00000381431 PSMG3-AS1Q96PY0 264 aa12.64□□□□□ -0.39
SGCB-201ENST00000381431 SPANXDQ9BXN6 97 aa12.64□□□□□ -0.39
SGCB-201ENST00000381431 HIGD2BQ4VC39 106 aa12.63□□□□□ -0.39
SGCB-201ENST00000381431 MUC4Q99102 2169 aa12.63□□□□□ -0.39
SGCB-201ENST00000381431 A0A096LNJ9 63 aa12.62□□□□□ -0.39
SGCB-201ENST00000381431 CXCL5P42830 114 aa12.62□□□□□ -0.39
SGCB-201ENST00000381431 LRRC75A-AS1Q8N1F1 130 aa12.62□□□□□ -0.39
SGCB-201ENST00000381431 VPS13AQ96RL7 3174 aa12.62□□□□□ -0.39
SGCB-201ENST00000381431 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
SGCB-201ENST00000381431 INSL3P51460 131 aa12.61□□□□□ -0.39
SGCB-201ENST00000381431 REG3AQ06141 175 aa12.61□□□□□ -0.39
SGCB-201ENST00000381431 MRGPRG-AS1Q2M3A8 158 aa12.61□□□□□ -0.39
SGCB-201ENST00000381431 CENPEQ02224 2701 aa12.61□□□□□ -0.39
SGCB-201ENST00000381431 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
SGCB-201ENST00000381431 TRBV6-8A0A0A6YYG3 113 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 JMJD7-PLA2G4BH0Y9G9 81 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 SLPIP03973 132 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 LINC01006Q8NI28 216 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 PYGO1Q9Y3Y4 419 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 F8P00451 2351 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 COL5A1P20908 1838 aaPredicted RBP12.6□□□□□ -0.39
SGCB-201ENST00000381431 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
SGCB-201ENST00000381431 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
SGCB-201ENST00000381431 CHCHD10Q8WYQ3 142 aaPredicted RBP12.59□□□□□ -0.39
SGCB-201ENST00000381431 INAFM1C9JVW0 142 aa12.59□□□□□ -0.39
SGCB-201ENST00000381431 RBM3P98179 157 aaKnown RBP12.59□□□□□ -0.39
SGCB-201ENST00000381431 RAI1Q7Z5J4 1906 aaPredicted RBP12.59□□□□□ -0.39
SGCB-201ENST00000381431 TIRAPP58753 221 aa12.59□□□□□ -0.39
SGCB-201ENST00000381431 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
SGCB-201ENST00000381431 IGIPA6NJ69 53 aa12.58□□□□□ -0.4
SGCB-201ENST00000381431 KRTAP10-9P60411 292 aa12.58□□□□□ -0.4
SGCB-201ENST00000381431 RNF183Q96D59 192 aa12.58□□□□□ -0.4
SGCB-201ENST00000381431 ADAMTS20P59510 1910 aa12.58□□□□□ -0.4
SGCB-201ENST00000381431 XAGE1AQ9HD64 81 aa12.57□□□□□ -0.4
SGCB-201ENST00000381431 CELSR3Q9NYQ7 3312 aa12.57□□□□□ -0.4
SGCB-201ENST00000381431 ATOX1O00244 68 aa12.57□□□□□ -0.4
SGCB-201ENST00000381431 NREPQ16612 68 aa12.57□□□□□ -0.4
SGCB-201ENST00000381431 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
SGCB-201ENST00000381431 LINC00526Q96FQ7 95 aa12.56□□□□□ -0.4
SGCB-201ENST00000381431 TRIOO75962 3097 aa12.56□□□□□ -0.4
SGCB-201ENST00000381431 LINC00643Q86TS7 51 aa12.56□□□□□ -0.4
SGCB-201ENST00000381431 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
SGCB-201ENST00000381431 TRBV30A0A0K0K1B3 111 aa12.55□□□□□ -0.4
SGCB-201ENST00000381431 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
SGCB-201ENST00000381431 TMEM256-PLSCR3K7ERE1 68 aa12.55□□□□□ -0.4
SGCB-201ENST00000381431 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms