RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GTSF1LQ9H1H1 148 aa16.49■□□□□ 0.23
VPS16-201ENST00000380443 A0A0J9YY99 117 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 GAGE12BA1L429 117 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 GAGE7O76087 117 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 GAGE12FP0CL80 117 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 GAGE12GP0CL81 117 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 GAGE12IP0CL82 117 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 OR5A1Q8NGJ0 315 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 RAB37Q96AX2 223 aa16.48■□□□□ 0.23
VPS16-201ENST00000380443 A0A1W2PPM0 123 aa16.47■□□□□ 0.23
VPS16-201ENST00000380443 DGAT2L7PQ6IED9 249 aa16.47■□□□□ 0.23
VPS16-201ENST00000380443 SRSF9Q13242 221 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS16-201ENST00000380443 C12orf74Q32Q52 190 aa16.47■□□□□ 0.23
VPS16-201ENST00000380443 KIR2DL5BQ8NHK3 375 aa16.47■□□□□ 0.23
VPS16-201ENST00000380443 K7EP13 123 aa16.46■□□□□ 0.23
VPS16-201ENST00000380443 FABP2P12104 132 aa16.46■□□□□ 0.23
VPS16-201ENST00000380443 TSPEAR-AS2P59090 65 aa16.46■□□□□ 0.23
VPS16-201ENST00000380443 SAMD5Q5TGI4 173 aa16.46■□□□□ 0.23
VPS16-201ENST00000380443 CEMP1Q6PRD7 247 aaPredicted RBP16.46■□□□□ 0.23
VPS16-201ENST00000380443 TIRAPP58753 221 aa16.45■□□□□ 0.22
VPS16-201ENST00000380443 H7C423 109 aa16.45■□□□□ 0.22
VPS16-201ENST00000380443 K7EP34 96 aa16.45■□□□□ 0.22
VPS16-201ENST00000380443 Q6ZUT4 128 aa16.45■□□□□ 0.22
VPS16-201ENST00000380443 UBE2D1P51668 147 aa16.43■□□□□ 0.22
VPS16-201ENST00000380443 SBSPONQ8IVN8 264 aa16.43■□□□□ 0.22
VPS16-201ENST00000380443 C3orf56Q8N813 242 aa16.43■□□□□ 0.22
VPS16-201ENST00000380443 TRGV4A0A0C4DH28 118 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 GAGE12JA6NER3 117 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 GAGE4Q13068 117 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 GAGE5Q13069 117 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 GAGE13Q4V321 117 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 FAM19A3Q7Z5A8 133 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 LINC00612Q8N6U2 182 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 IGHV1-58A0A0C4DH39 117 aa16.42■□□□□ 0.22
VPS16-201ENST00000380443 GEMIN7Q9H840 131 aaKnown RBP16.42■□□□□ 0.22
VPS16-201ENST00000380443 IGLV5-45A0A087WSX0 123 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 IGLL5B9A064 214 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 K7ERJ3 54 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 IGHV3-30-3P0DP02 117 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 FHL2Q14192 279 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 NTM-AS1Q6ZSK4 140 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 WFDC9Q8NEX5 89 aa16.4■□□□□ 0.22
VPS16-201ENST00000380443 TMEM243Q9BU79 118 aa16.39■□□□□ 0.21
VPS16-201ENST00000380443 SPCS1Q9Y6A9 102 aa16.39■□□□□ 0.21
VPS16-201ENST00000380443 APOC4P55056 127 aa16.38■□□□□ 0.21
VPS16-201ENST00000380443 HERVK_113P63121 156 aa16.38■□□□□ 0.21
VPS16-201ENST00000380443 RNASE13Q5GAN3 156 aaKnown RBP16.38■□□□□ 0.21
VPS16-201ENST00000380443 TMEM238C9JI98 176 aa16.37■□□□□ 0.21
VPS16-201ENST00000380443 IGHV3-30P01768 117 aa16.37■□□□□ 0.21
VPS16-201ENST00000380443 IGHV3-30-5P0DP03 117 aa16.37■□□□□ 0.21
VPS16-201ENST00000380443 VSIG2Q96IQ7 327 aa16.37■□□□□ 0.21
VPS16-201ENST00000380443 WIPF1O43516 503 aa16.36■□□□□ 0.21
VPS16-201ENST00000380443 TMEM101Q96IK0 257 aa16.36■□□□□ 0.21
VPS16-201ENST00000380443 X6R8D5 127 aa16.36■□□□□ 0.21
VPS16-201ENST00000380443 UBE2L6O14933 153 aa16.35■□□□□ 0.21
VPS16-201ENST00000380443 NAA38Q9BRA0 125 aaKnown RBP16.35■□□□□ 0.21
VPS16-201ENST00000380443 LINC00694P0DN24 101 aa16.35■□□□□ 0.21
VPS16-201ENST00000380443 SHISA2Q6UWI4 295 aa16.35■□□□□ 0.21
VPS16-201ENST00000380443 CDC42SE2Q9NRR3 84 aa16.35■□□□□ 0.21
VPS16-201ENST00000380443 LYRM9A8MSI8 78 aa16.34■□□□□ 0.21
VPS16-201ENST00000380443 IGHV3-64A0A075B6Q5 118 aa16.33■□□□□ 0.2
VPS16-201ENST00000380443 STAB1Q9NY15 2570 aa16.32■□□□□ 0.2
VPS16-201ENST00000380443 A0A0J9YXY3 114 aa16.32■□□□□ 0.2
VPS16-201ENST00000380443 TENM1Q9UKZ4 2725 aa16.32■□□□□ 0.2
VPS16-201ENST00000380443 RPL24P83731 157 aaKnown RBP16.31■□□□□ 0.2
VPS16-201ENST00000380443 ZFAND6Q6FIF0 208 aa16.31■□□□□ 0.2
VPS16-201ENST00000380443 C10orf126Q8N4M7 172 aa16.31■□□□□ 0.2
VPS16-201ENST00000380443 NDUFA12Q9UI09 145 aa16.31■□□□□ 0.2
VPS16-201ENST00000380443 LINC00242Q5T6M2 205 aa16.3■□□□□ 0.2
VPS16-201ENST00000380443 CDKN2A-AS1Q9UH64 79 aa16.3■□□□□ 0.2
VPS16-201ENST00000380443 TRAV8-3A0A0A6YYJ7 113 aa16.29■□□□□ 0.2
VPS16-201ENST00000380443 TRBV6-8A0A0A6YYG3 113 aa16.29■□□□□ 0.2
VPS16-201ENST00000380443 LOC100131303A0A0U1RQF7 123 aa16.29■□□□□ 0.2
VPS16-201ENST00000380443 SPINK8P0C7L1 97 aa16.29■□□□□ 0.2
VPS16-201ENST00000380443 DEFB130BP0DP73 79 aa16.29■□□□□ 0.2
VPS16-201ENST00000380443 DEFB130AP0DP74 79 aa16.29■□□□□ 0.2
VPS16-201ENST00000380443 TIMM17BO60830 172 aa16.28■□□□□ 0.2
VPS16-201ENST00000380443 ANK2Q01484 3957 aa16.27■□□□□ 0.2
VPS16-201ENST00000380443 DNHD1Q96M86 4753 aa16.27■□□□□ 0.2
VPS16-201ENST00000380443 IGLV5-39A0A0G2JS06 123 aa16.27■□□□□ 0.2
VPS16-201ENST00000380443 SPANXDQ9BXN6 97 aa16.26■□□□□ 0.19
VPS16-201ENST00000380443 PGPEP1Q9NXJ5 209 aa16.26■□□□□ 0.19
VPS16-201ENST00000380443 SPANXCQ9NY87 97 aa16.26■□□□□ 0.19
VPS16-201ENST00000380443 PRO0255Q9UI72 69 aa16.26■□□□□ 0.19
VPS16-201ENST00000380443 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.26■□□□□ 0.19
VPS16-201ENST00000380443 LYRM7Q5U5X0 104 aa16.26■□□□□ 0.19
VPS16-201ENST00000380443 PCP4P48539 62 aa16.25■□□□□ 0.19
VPS16-201ENST00000380443 NDUFA1O15239 70 aa16.24■□□□□ 0.19
VPS16-201ENST00000380443 CFC1BP0CG36 223 aa16.24■□□□□ 0.19
VPS16-201ENST00000380443 CFC1P0CG37 223 aa16.24■□□□□ 0.19
VPS16-201ENST00000380443 COX6A2Q02221 97 aa16.24■□□□□ 0.19
VPS16-201ENST00000380443 MIFP14174 115 aa16.24■□□□□ 0.19
VPS16-201ENST00000380443 NOTCH3Q9UM47 2321 aa16.23■□□□□ 0.19
VPS16-201ENST00000380443 APOMO95445 188 aa16.23■□□□□ 0.19
VPS16-201ENST00000380443 RNF183Q96D59 192 aa16.23■□□□□ 0.19
VPS16-201ENST00000380443 LITAFQ99732 161 aa16.23■□□□□ 0.19
VPS16-201ENST00000380443 TRAV13-1A0A0B4J241 112 aa16.22■□□□□ 0.19
VPS16-201ENST00000380443 A0A0B4J2C4 111 aa16.22■□□□□ 0.19
VPS16-201ENST00000380443 FAM222AQ5U5X8 452 aa16.22■□□□□ 0.19
VPS16-201ENST00000380443 MUSTN1Q8IVN3 82 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms