RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
USP3-202ENST00000380324 MRPS36P82909 103 aaKnown RBP8.51□□□□□ -1.05
USP3-202ENST00000380324 MAST4O15021 2626 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 BAHCC1Q9P281 2608 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 TRBV6-4A0A1B0GX49 114 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 H3BRM9 83 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 H3BUT2 72 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 DEFB4AO15263 64 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 CCL25O15444 150 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 TM2D2Q9BX73 214 aa8.51□□□□□ -1.05
USP3-202ENST00000380324 FBN1P35555 2871 aaKnown RBP8.5□□□□□ -1.05
USP3-202ENST00000380324 CRYBA4P53673 196 aa8.5□□□□□ -1.05
USP3-202ENST00000380324 FHL2Q14192 279 aa8.5□□□□□ -1.05
USP3-202ENST00000380324 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
USP3-202ENST00000380324 UBE2V1Q13404 147 aa8.49□□□□□ -1.05
USP3-202ENST00000380324 SRSF9Q13242 221 aaKnown RBP eCLIP8.49□□□□□ -1.05
USP3-202ENST00000380324 TAL2Q16559 108 aa8.49□□□□□ -1.05
USP3-202ENST00000380324 KRTAP24-1Q3LI83 254 aa8.49□□□□□ -1.05
USP3-202ENST00000380324 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
USP3-202ENST00000380324 C9orf118A6NHY6 69 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 LEPROTO15243 131 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 APOC4P55056 127 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 A0A0J9YY99 117 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 UBE2L6O14933 153 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 UBE2D1P51668 147 aa8.48□□□□□ -1.05
USP3-202ENST00000380324 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
USP3-202ENST00000380324 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 CIDEAO60543 219 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 SPINK8P0C7L1 97 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 WFDC9Q8NEX5 89 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 KIR2DL5BQ8NHK3 375 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 SBSPONQ8IVN8 264 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
USP3-202ENST00000380324 TRAV13-1A0A0B4J241 112 aa8.46□□□□□ -1.05
USP3-202ENST00000380324 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.05
USP3-202ENST00000380324 A8MZ25 164 aa8.46□□□□□ -1.05
USP3-202ENST00000380324 IGHV4-30-4P0DP06 118 aa8.46□□□□□ -1.05
USP3-202ENST00000380324 OXLD1Q5BKU9 147 aa8.46□□□□□ -1.05
USP3-202ENST00000380324 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.05
USP3-202ENST00000380324 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
USP3-202ENST00000380324 CDKN2A-AS1Q9UH64 79 aa8.46□□□□□ -1.06
USP3-202ENST00000380324 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
USP3-202ENST00000380324 GTSF1LQ9H1H1 148 aa8.45□□□□□ -1.06
USP3-202ENST00000380324 GYPEP15421 78 aa8.45□□□□□ -1.06
USP3-202ENST00000380324 C12orf74Q32Q52 190 aa8.45□□□□□ -1.06
USP3-202ENST00000380324 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
USP3-202ENST00000380324 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
USP3-202ENST00000380324 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
USP3-202ENST00000380324 COX6A2Q02221 97 aa8.44□□□□□ -1.06
USP3-202ENST00000380324 GAGE6Q13070 117 aa8.44□□□□□ -1.06
USP3-202ENST00000380324 A0A096LPF7 62 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 WIPF1O43516 503 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 C3orf56Q8N813 242 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
USP3-202ENST00000380324 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 IGKV3OR2-268A0A0C4DH90 116 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
USP3-202ENST00000380324 CYSRT1A8MQ03 144 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 LYRM9A8MSI8 78 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 CELA1Q9UNI1 258 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 ANK2Q01484 3957 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 HERVK_113P63121 156 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 SMAGPQ0VAQ4 97 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 Q8NAQ8 132 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 SPANXB1Q9NS25 103 aaPredicted RBP8.42□□□□□ -1.06
USP3-202ENST00000380324 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
USP3-202ENST00000380324 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 APOMO95445 188 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 FABP2P12104 132 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 K7EP34 96 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 TIRAPP58753 221 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 DAD1P61803 113 aa8.41□□□□□ -1.06
USP3-202ENST00000380324 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
USP3-202ENST00000380324 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
USP3-202ENST00000380324 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
USP3-202ENST00000380324 COL6A5A8TX70 2615 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 A0A1B0GWB2 263 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 IGLL5B9A064 214 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 TMEM238C9JI98 176 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 PAX4O43316 350 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 MIFP14174 115 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 KRTAP10-11P60412 298 aa8.4□□□□□ -1.07
USP3-202ENST00000380324 CMYA5Q8N3K9 4069 aa8.39□□□□□ -1.07
USP3-202ENST00000380324 HTN3P15516 51 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms