RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
NFX1-202ENST00000379521 C1QTNF4Q9BXJ3 329 aa4.74□□□□□ -1.65
NFX1-202ENST00000379521 SPCS1Q9Y6A9 102 aa4.74□□□□□ -1.65
NFX1-202ENST00000379521 SCGB1A1P11684 91 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 MRPL16Q9NX20 251 aaKnown RBP4.73□□□□□ -1.65
NFX1-202ENST00000379521 TMEM238LA0A1B0GVL6 79 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 A6NJY4 79 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 SAP30O75446 220 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 HERVK_113P63121 156 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 C2orf82Q6UX34 121 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 OR4C5Q8NGB2 326 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 LINC00167Q96N53 147 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 CSMD3Q7Z407 3707 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 SPTAN1Q13813 2472 aaKnown RBP4.73□□□□□ -1.65
NFX1-202ENST00000379521 Q8NAQ8 132 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 VCX2Q9H322 139 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 SELENOKQ9Y6D0 94 aa4.73□□□□□ -1.65
NFX1-202ENST00000379521 IGKV3-7A0A075B6H7 116 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 A0A087WZ39 114 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 H3BNG1 76 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 GCSHP23434 173 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 SOSTDC1Q6X4U4 206 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 CDIP1Q9H305 208 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
NFX1-202ENST00000379521 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
NFX1-202ENST00000379521 VAMP3Q15836 100 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 STHQ8IWL8 128 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 NSD1Q96L73 2696 aaPredicted RBP4.72□□□□□ -1.65
NFX1-202ENST00000379521 TENM1Q9UKZ4 2725 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 MAP1AP78559 2803 aaPredicted RBP4.72□□□□□ -1.65
NFX1-202ENST00000379521 TCL1BO95988 128 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 HIST2H2BCQ6DN03 193 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
NFX1-202ENST00000379521 MUSTN1Q8IVN3 82 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 LINC01587Q99440 93 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 HIST1H4GQ99525 98 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 CDKN2A-AS1Q9UH64 79 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 CBY1Q9Y3M2 126 aa4.72□□□□□ -1.65
NFX1-202ENST00000379521 GCN1Q92616 2671 aaKnown RBP4.71□□□□□ -1.65
NFX1-202ENST00000379521 TRBV6-8A0A0A6YYG3 113 aa4.71□□□□□ -1.65
NFX1-202ENST00000379521 LYRM9A8MSI8 78 aa4.71□□□□□ -1.65
NFX1-202ENST00000379521 TMEM238C9JI98 176 aa4.71□□□□□ -1.65
NFX1-202ENST00000379521 KRTAP26-1Q6PEX3 210 aa4.71□□□□□ -1.65
NFX1-202ENST00000379521 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.71□□□□□ -1.66
NFX1-202ENST00000379521 A0A1W2PRX2 142 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 DYNLRB2Q8TF09 96 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 TIMM8BQ9Y5J9 83 aaPredicted RBP4.71□□□□□ -1.66
NFX1-202ENST00000379521 A4D1N5 150 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 CRLF1O75462 422 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 HERV-K104P63124 156 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 KIAA0087Q14695 138 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 FAM222AQ5U5X8 452 aa4.71□□□□□ -1.66
NFX1-202ENST00000379521 ACACBO00763 2458 aa4.7□□□□□ -1.66
NFX1-202ENST00000379521 IGKV3-20P01619 116 aa4.7□□□□□ -1.66
NFX1-202ENST00000379521 WFDC2Q14508 124 aa4.7□□□□□ -1.66
NFX1-202ENST00000379521 FAM74A4Q5TZK3 123 aa4.7□□□□□ -1.66
NFX1-202ENST00000379521 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
NFX1-202ENST00000379521 COTL1Q14019 142 aa4.7□□□□□ -1.66
NFX1-202ENST00000379521 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
NFX1-202ENST00000379521 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
NFX1-202ENST00000379521 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
NFX1-202ENST00000379521 BAHCC1Q9P281 2608 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 TRAV8-3A0A0A6YYJ7 113 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 PGPEP1Q9NXJ5 209 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 XCL2Q9UBD3 114 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 IGKV2-28A0A075B6P5 120 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 TEX48A0A1B0GUV7 120 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 IGKV2D-28P01615 120 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 HIST2H2BDQ6DRA6 164 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 WFDC10AQ9H1F0 79 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
NFX1-202ENST00000379521 F5H697 171 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 LST1O00453 97 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 FOXI1Q12951 378 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 MUC7Q8TAX7 377 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 ZNF418Q8TF45 676 aaPredicted RBP4.68□□□□□ -1.66
NFX1-202ENST00000379521 K7ERU9 68 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 PF4P02776 101 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 RPL36AP83881 106 aaKnown RBP4.68□□□□□ -1.66
NFX1-202ENST00000379521 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 RPL36ALQ969Q0 106 aaKnown RBP4.68□□□□□ -1.66
NFX1-202ENST00000379521 FRAS1Q86XX4 4008 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 GVQW2A0A096LPI5 108 aaPredicted RBP4.68□□□□□ -1.66
NFX1-202ENST00000379521 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
NFX1-202ENST00000379521 C9orf66Q5T8R8 295 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 NDUFA12Q9UI09 145 aa4.68□□□□□ -1.66
NFX1-202ENST00000379521 LRRK2Q5S007 2527 aa4.67□□□□□ -1.66
NFX1-202ENST00000379521 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
NFX1-202ENST00000379521 TRIAP1O43715 76 aa4.67□□□□□ -1.66
NFX1-202ENST00000379521 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
NFX1-202ENST00000379521 GAGE13Q4V321 117 aa4.67□□□□□ -1.66
NFX1-202ENST00000379521 YAE1D1Q9NRH1 226 aa4.67□□□□□ -1.66
NFX1-202ENST00000379521 EMP1P54849 157 aa4.67□□□□□ -1.66
NFX1-202ENST00000379521 C11orf68Q9H3H3 251 aaKnown RBP4.67□□□□□ -1.66
NFX1-202ENST00000379521 NOP10Q9NPE3 64 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms