RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 LINC01006Q8NI28 216 aa10□□□□□ -0.81
PCDHA6-201ENST00000378126 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 CHCHD7Q9BUK0 85 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 GAGE7O76087 117 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 LRRC75A-AS1Q8N1F1 130 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 OTOGQ6ZRI0 2925 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 LINC00694P0DN24 101 aa9.99□□□□□ -0.81
PCDHA6-201ENST00000378126 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
PCDHA6-201ENST00000378126 LEPROTO15243 131 aa9.98□□□□□ -0.81
PCDHA6-201ENST00000378126 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
PCDHA6-201ENST00000378126 UBE2D1P51668 147 aa9.97□□□□□ -0.81
PCDHA6-201ENST00000378126 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
PCDHA6-201ENST00000378126 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
PCDHA6-201ENST00000378126 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
PCDHA6-201ENST00000378126 TRGV2A0A075B6R0 118 aa9.97□□□□□ -0.81
PCDHA6-201ENST00000378126 TCL1BO95988 128 aa9.96□□□□□ -0.81
PCDHA6-201ENST00000378126 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.81
PCDHA6-201ENST00000378126 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
PCDHA6-201ENST00000378126 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
PCDHA6-201ENST00000378126 ADAMTSL4-AS1Q5T5F5 129 aa9.96□□□□□ -0.82
PCDHA6-201ENST00000378126 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.95□□□□□ -0.82
PCDHA6-201ENST00000378126 COX6A2Q02221 97 aa9.95□□□□□ -0.82
PCDHA6-201ENST00000378126 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
PCDHA6-201ENST00000378126 F8W1H4 67 aa9.94□□□□□ -0.82
PCDHA6-201ENST00000378126 HERV-K104P63124 156 aa9.94□□□□□ -0.82
PCDHA6-201ENST00000378126 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
PCDHA6-201ENST00000378126 DEFB130BP0DP73 79 aa9.93□□□□□ -0.82
PCDHA6-201ENST00000378126 DEFB130AP0DP74 79 aa9.93□□□□□ -0.82
PCDHA6-201ENST00000378126 KRTAP1-1Q07627 177 aa9.93□□□□□ -0.82
PCDHA6-201ENST00000378126 PRO0461Q9UI25 63 aa9.93□□□□□ -0.82
PCDHA6-201ENST00000378126 RS1O15537 224 aa9.92□□□□□ -0.82
PCDHA6-201ENST00000378126 B5MCH6 92 aa9.92□□□□□ -0.82
PCDHA6-201ENST00000378126 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
PCDHA6-201ENST00000378126 ANK3Q12955 4377 aaKnown RBP9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 FLNBO75369 2602 aaKnown RBP9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 A0A096LPF7 62 aa9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 A8MTW9 85 aa9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 J3QR89 54 aa9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
PCDHA6-201ENST00000378126 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
PCDHA6-201ENST00000378126 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.82
PCDHA6-201ENST00000378126 FHL3Q13643 280 aa9.9□□□□□ -0.82
PCDHA6-201ENST00000378126 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
PCDHA6-201ENST00000378126 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.82
PCDHA6-201ENST00000378126 C9JAW5 83 aa9.9□□□□□ -0.82
PCDHA6-201ENST00000378126 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.83
PCDHA6-201ENST00000378126 RNF183Q96D59 192 aa9.9□□□□□ -0.83
PCDHA6-201ENST00000378126 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.83
PCDHA6-201ENST00000378126 PYGO1Q9Y3Y4 419 aa9.9□□□□□ -0.83
PCDHA6-201ENST00000378126 K7EQD1 137 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 DEFB4AO15263 64 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 GAGE6Q13070 117 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 BEAN1Q3B7T3 259 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 SPATA3Q8NHX4 192 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
PCDHA6-201ENST00000378126 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 Q9H8V8 135 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 PF4P02776 101 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 UBE2D3P61077 147 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 UBE2D2P62837 147 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 TMEM263Q8WUH6 116 aaKnown RBP9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
PCDHA6-201ENST00000378126 UBE2L6O14933 153 aa9.87□□□□□ -0.83
PCDHA6-201ENST00000378126 J3QKU1 62 aa9.87□□□□□ -0.83
PCDHA6-201ENST00000378126 TINCRA0A1B0GVN0 87 aa9.87□□□□□ -0.83
PCDHA6-201ENST00000378126 LINC00482Q8N8I6 264 aa9.87□□□□□ -0.83
PCDHA6-201ENST00000378126 C11orf68Q9H3H3 251 aaKnown RBP9.87□□□□□ -0.83
PCDHA6-201ENST00000378126 TRRAPQ9Y4A5 3859 aa9.86□□□□□ -0.83
PCDHA6-201ENST00000378126 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
PCDHA6-201ENST00000378126 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
PCDHA6-201ENST00000378126 LITAFQ99732 161 aa9.86□□□□□ -0.83
PCDHA6-201ENST00000378126 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
PCDHA6-201ENST00000378126 CLEC2BQ92478 149 aa9.85□□□□□ -0.83
PCDHA6-201ENST00000378126 ANAPC13Q9BS18 74 aa9.85□□□□□ -0.83
PCDHA6-201ENST00000378126 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
PCDHA6-201ENST00000378126 FOXI1Q12951 378 aa9.85□□□□□ -0.83
PCDHA6-201ENST00000378126 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
PCDHA6-201ENST00000378126 TEP1Q99973 2627 aaKnown RBP9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 NSD1Q96L73 2696 aaPredicted RBP9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 TRIAP1O43715 76 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 RNASE1P07998 156 aaKnown RBP9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 KRTAP10-3P60369 221 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 CITED1Q99966 193 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 CHCHD5Q9BSY4 110 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 HIVEP1P15822 2718 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 C3orf56Q8N813 242 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
PCDHA6-201ENST00000378126 PRIMA1Q86XR5 153 aa9.83□□□□□ -0.84
PCDHA6-201ENST00000378126 CRLF1O75462 422 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms