RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZNF318Q5VUA4 2279 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 CCKP06307 115 aa6.38□□□□□ -1.39
PCDH9-202ENST00000377865 SLPIP03973 132 aa6.38□□□□□ -1.39
PCDH9-202ENST00000377865 ROS1P08922 2347 aa6.38□□□□□ -1.39
PCDH9-202ENST00000377865 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
PCDH9-202ENST00000377865 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
PCDH9-202ENST00000377865 LYRM9A8MSI8 78 aa6.37□□□□□ -1.39
PCDH9-202ENST00000377865 PTPRZ1P23471 2315 aaPredicted RBP6.37□□□□□ -1.39
PCDH9-202ENST00000377865 IGHV4-31P0DP07 118 aa6.37□□□□□ -1.39
PCDH9-202ENST00000377865 LINC00315P59091 139 aa6.37□□□□□ -1.39
PCDH9-202ENST00000377865 HIGD2BQ4VC39 106 aa6.37□□□□□ -1.39
PCDH9-202ENST00000377865 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
PCDH9-202ENST00000377865 REG3AQ06141 175 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 BEAN1Q3B7T3 259 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
PCDH9-202ENST00000377865 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 C10orf99Q6UWK7 81 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 NAV3Q8IVL0 2385 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 ETDCA0A1B0GVM5 59 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 Q8IZM0 81 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 DNAJC9-AS1A6NH13 148 aa6.36□□□□□ -1.39
PCDH9-202ENST00000377865 CITED2Q99967 270 aaPredicted RBP6.36□□□□□ -1.39
PCDH9-202ENST00000377865 GPR179Q6PRD1 2367 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 COX6A2Q02221 97 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 DEFB105AQ8NG35 78 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 NCOR1O75376 2440 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 PLXNB1O43157 2135 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 LINC00959A0A1B0GUT2 108 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 CCL18P55774 89 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 Q6ZSV7 163 aa6.35□□□□□ -1.39
PCDH9-202ENST00000377865 IGKV2D-24A0A075B6R9 120 aa6.34□□□□□ -1.39
PCDH9-202ENST00000377865 EDN2P20800 178 aa6.34□□□□□ -1.39
PCDH9-202ENST00000377865 PLCE1Q9P212 2302 aa6.34□□□□□ -1.39
PCDH9-202ENST00000377865 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
PCDH9-202ENST00000377865 SRCAPQ6ZRS2 3230 aa6.34□□□□□ -1.39
PCDH9-202ENST00000377865 ABCA1O95477 2261 aa6.34□□□□□ -1.39
PCDH9-202ENST00000377865 KLK5Q9Y337 293 aaPredicted RBP6.34□□□□□ -1.39
PCDH9-202ENST00000377865 NRGNQ92686 78 aa6.34□□□□□ -1.4
PCDH9-202ENST00000377865 PSCAO43653 123 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 MP68P56378 58 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 PKIGQ9Y2B9 76 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 C6orf99Q4VX62 202 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 UBE2DNLQ8IWF7 75 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 WNK2Q9Y3S1 2297 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 IGLV5-39A0A0G2JS06 123 aa6.33□□□□□ -1.4
PCDH9-202ENST00000377865 BPY2O14599 106 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 CDSNQ15517 529 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 ARFGEF3Q5TH69 2177 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 A0A087WYN8 130 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 CACNA1GO43497 2377 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 A0A087WZ39 114 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 KLK12Q9UKR0 248 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 COL27A1Q8IZC6 1860 aaPredicted RBP6.32□□□□□ -1.4
PCDH9-202ENST00000377865 TRAV7A0A075B6U4 112 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 DEFB121Q5J5C9 76 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 LINC01561Q8N1V8 128 aa6.32□□□□□ -1.4
PCDH9-202ENST00000377865 IGLV5-45A0A087WSX0 123 aa6.31□□□□□ -1.4
PCDH9-202ENST00000377865 UBE2BP63146 152 aa6.31□□□□□ -1.4
PCDH9-202ENST00000377865 Q8N814 137 aa6.31□□□□□ -1.4
PCDH9-202ENST00000377865 SERP1Q9Y6X1 66 aa6.31□□□□□ -1.4
PCDH9-202ENST00000377865 PTPRBP23467 1997 aa6.31□□□□□ -1.4
PCDH9-202ENST00000377865 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.3□□□□□ -1.4
PCDH9-202ENST00000377865 Q6ZSN1 163 aa6.3□□□□□ -1.4
PCDH9-202ENST00000377865 LOC100131303A0A0U1RQF7 123 aa6.3□□□□□ -1.4
PCDH9-202ENST00000377865 DEFB135Q30KP9 77 aa6.29□□□□□ -1.4
PCDH9-202ENST00000377865 C18orf65Q6ZTR6 163 aa6.29□□□□□ -1.4
PCDH9-202ENST00000377865 SPTA1P02549 2419 aa6.29□□□□□ -1.4
PCDH9-202ENST00000377865 DSCAML1Q8TD84 2053 aa6.29□□□□□ -1.4
PCDH9-202ENST00000377865 PRM2P04554 102 aa6.29□□□□□ -1.4
PCDH9-202ENST00000377865 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
PCDH9-202ENST00000377865 POLEQ07864 2286 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 IGHV4-28A0A0C4DH34 117 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 CRYGAP11844 174 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 WFDC9Q8NEX5 89 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 TRBV10-3A0A0K0K1G6 114 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 SHISA2Q6UWI4 295 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 ESM1Q9NQ30 184 aa6.28□□□□□ -1.4
PCDH9-202ENST00000377865 ODF3L2Q3SX64 289 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 NACAE9PAV3 2078 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 M0R378 163 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 FAM19A5Q7Z5A7 132 aaPredicted RBP6.27□□□□□ -1.41
PCDH9-202ENST00000377865 PPDPFQ9H3Y8 114 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 CNOT1A5YKK6 2376 aaKnown RBP6.27□□□□□ -1.41
PCDH9-202ENST00000377865 Q6ZQY7 126 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
PCDH9-202ENST00000377865 AVPP01185 164 aa6.26□□□□□ -1.41
PCDH9-202ENST00000377865 MIFP14174 115 aa6.26□□□□□ -1.41
PCDH9-202ENST00000377865 EP300Q09472 2414 aaPredicted RBP6.26□□□□□ -1.41
PCDH9-202ENST00000377865 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
PCDH9-202ENST00000377865 C11orf72Q8NBR9 251 aa6.26□□□□□ -1.41
PCDH9-202ENST00000377865 PCNX1Q96RV3 2341 aa6.26□□□□□ -1.41
PCDH9-202ENST00000377865 LITAFQ99732 161 aa6.26□□□□□ -1.41
PCDH9-202ENST00000377865 LELP1Q5T871 98 aa6.26□□□□□ -1.41
PCDH9-202ENST00000377865 BBC3Q96PG8 261 aaPredicted RBP6.26□□□□□ -1.41
PCDH9-202ENST00000377865 ACACAQ13085 2346 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 BCE1O60756 84 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms