RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
SF1-203ENST00000377387 FSHBP01225 129 aa13.11□□□□□ -0.31
SF1-203ENST00000377387 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
SF1-203ENST00000377387 TRGV1A0A0A0MS02 117 aa13.1□□□□□ -0.31
SF1-203ENST00000377387 INSP01308 110 aa13.09□□□□□ -0.31
SF1-203ENST00000377387 CKS1BP61024 79 aa13.09□□□□□ -0.31
SF1-203ENST00000377387 NTN5Q8WTR8 489 aaPredicted RBP13.09□□□□□ -0.31
SF1-203ENST00000377387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.09□□□□□ -0.31
SF1-203ENST00000377387 TINCRA0A1B0GVN0 87 aa13.09□□□□□ -0.31
SF1-203ENST00000377387 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
SF1-203ENST00000377387 COX6A2Q02221 97 aa13.08□□□□□ -0.32
SF1-203ENST00000377387 SPANXA1Q9NS26 97 aa13.08□□□□□ -0.32
SF1-203ENST00000377387 SETXQ7Z333 2677 aaKnown RBP13.08□□□□□ -0.32
SF1-203ENST00000377387 CIDEAO60543 219 aa13.08□□□□□ -0.32
SF1-203ENST00000377387 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
SF1-203ENST00000377387 CRYBA4P53673 196 aa13.07□□□□□ -0.32
SF1-203ENST00000377387 LINC01620Q4KN68 170 aa13.07□□□□□ -0.32
SF1-203ENST00000377387 ATXN8Q156A1 80 aa13.07□□□□□ -0.32
SF1-203ENST00000377387 STHQ8IWL8 128 aa13.07□□□□□ -0.32
SF1-203ENST00000377387 TRAV13-1A0A0B4J241 112 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 LINC00694P0DN24 101 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 CLEC2BQ92478 149 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 A0A1B0GV72 72 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 ODF3L2Q3SX64 289 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 EDA2RQ9HAV5 297 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 TEX49A0A1B0GTD5 131 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 A8MTW9 85 aa13.06□□□□□ -0.32
SF1-203ENST00000377387 MIAQ16674 131 aa13.05□□□□□ -0.32
SF1-203ENST00000377387 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
SF1-203ENST00000377387 TMEM101Q96IK0 257 aa13.05□□□□□ -0.32
SF1-203ENST00000377387 ICOSQ9Y6W8 199 aa13.05□□□□□ -0.32
SF1-203ENST00000377387 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
SF1-203ENST00000377387 WFDC11Q8NEX6 87 aa13.04□□□□□ -0.32
SF1-203ENST00000377387 Q6ZTI0 123 aa13.04□□□□□ -0.32
SF1-203ENST00000377387 C1orf158Q8N1D5 194 aa13.04□□□□□ -0.32
SF1-203ENST00000377387 RS1O15537 224 aa13.03□□□□□ -0.32
SF1-203ENST00000377387 FASNP49327 2511 aaKnown RBP13.03□□□□□ -0.32
SF1-203ENST00000377387 HECTD1Q9ULT8 2610 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 GAGE12JA6NER3 117 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 GAGE4Q13068 117 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 GAGE5Q13069 117 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 BEAN1Q3B7T3 259 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 ZFAND6Q6FIF0 208 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 Q9H8V8 135 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 TRBV30A0A0K0K1B3 111 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
SF1-203ENST00000377387 SPANXDQ9BXN6 97 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 SPANXCQ9NY87 97 aa13.02□□□□□ -0.33
SF1-203ENST00000377387 Q8N2B8 174 aa13.01□□□□□ -0.33
SF1-203ENST00000377387 DNAJC30Q96LL9 226 aa13.01□□□□□ -0.33
SF1-203ENST00000377387 WFDC10AQ9H1F0 79 aa13.01□□□□□ -0.33
SF1-203ENST00000377387 C2orf82Q6UX34 121 aa13□□□□□ -0.33
SF1-203ENST00000377387 LINC00242Q5T6M2 205 aa12.99□□□□□ -0.33
SF1-203ENST00000377387 NOP10Q9NPE3 64 aaKnown RBP12.99□□□□□ -0.33
SF1-203ENST00000377387 COX6CP09669 75 aa12.99□□□□□ -0.33
SF1-203ENST00000377387 IGKV3OR2-268A0A0C4DH90 116 aa12.99□□□□□ -0.33
SF1-203ENST00000377387 PLA2G2AP14555 144 aa12.99□□□□□ -0.33
SF1-203ENST00000377387 NTM-AS1Q6ZSK4 140 aa12.99□□□□□ -0.33
SF1-203ENST00000377387 PIK3CD-AS1Q5SR53 167 aa12.98□□□□□ -0.33
SF1-203ENST00000377387 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
SF1-203ENST00000377387 TRBV10-2A0A0K0K1G8 114 aa12.98□□□□□ -0.33
SF1-203ENST00000377387 H7C423 109 aa12.97□□□□□ -0.33
SF1-203ENST00000377387 CCL24O00175 119 aa12.97□□□□□ -0.33
SF1-203ENST00000377387 RPL36AP83881 106 aaKnown RBP12.97□□□□□ -0.33
SF1-203ENST00000377387 RPL36ALQ969Q0 106 aaKnown RBP12.97□□□□□ -0.33
SF1-203ENST00000377387 RPL35AP18077 110 aaKnown RBP12.97□□□□□ -0.33
SF1-203ENST00000377387 PDZD2O15018 2839 aa12.96□□□□□ -0.33
SF1-203ENST00000377387 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
SF1-203ENST00000377387 TMEM262E9PQX1 116 aa12.96□□□□□ -0.33
SF1-203ENST00000377387 CIRBPQ14011 172 aaKnown RBP12.96□□□□□ -0.33
SF1-203ENST00000377387 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.33
SF1-203ENST00000377387 YAE1D1Q9NRH1 226 aa12.96□□□□□ -0.33
SF1-203ENST00000377387 LOC100131303A0A0U1RQF7 123 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 TIRAPP58753 221 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 NBEAL2Q6ZNJ1 2754 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 NDUFA1O15239 70 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
SF1-203ENST00000377387 K7EQD1 137 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 CRLF1O75462 422 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 GAGE7O76087 117 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 GAGE12FP0CL80 117 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 GAGE12GP0CL81 117 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 GAGE12IP0CL82 117 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
SF1-203ENST00000377387 UNC79Q9P2D8 2635 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 TRAV26-1A0A087WT03 109 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 HERVK_113P63121 156 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 HIVEP2P31629 2446 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 LINC00308Q8TCZ7 52 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
SF1-203ENST00000377387 TRGV2A0A075B6R0 118 aa12.93□□□□□ -0.34
SF1-203ENST00000377387 TRAV8-4A0A0B4J246 113 aa12.93□□□□□ -0.34
SF1-203ENST00000377387 TRAV4A0A0B4J268 109 aa12.92□□□□□ -0.34
SF1-203ENST00000377387 SMIM1B2RUZ4 78 aa12.92□□□□□ -0.34
SF1-203ENST00000377387 IGLV5-45A0A087WSX0 123 aa12.92□□□□□ -0.34
SF1-203ENST00000377387 SOSTDC1Q6X4U4 206 aa12.92□□□□□ -0.34
SF1-203ENST00000377387 TEX29Q8N6K0 151 aa12.92□□□□□ -0.34
SF1-203ENST00000377387 RNF183Q96D59 192 aa12.92□□□□□ -0.34
SF1-203ENST00000377387 UBE2L6O14933 153 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms