RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 DKK2Q9UBU2 259 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 NDUFA12Q9UI09 145 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 ESDP10768 282 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 Q6ZTC4 211 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 CRYBG3Q68DQ2 2970 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 CRYGDP07320 174 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 FABP2P12104 132 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 LGALS9BQ3B8N2 356 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 COX7A2LO14548 114 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 HERVK_113P63121 156 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 CFAP126Q5VTH2 177 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 NIPBLQ6KC79 2804 aaeCLIP6.19□□□□□ -1.422e-6■■□□□ 12.2
CRNKL1-202ENST00000377340 F8VRH5 84 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 CCL25O15444 150 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 IGLV2-11P01706 119 aa6.19□□□□□ -1.42
CRNKL1-202ENST00000377340 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 KLLNB2CW77 178 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 HIGD2BQ4VC39 106 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 ZNF580Q9UK33 172 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 TRBV6-1A0A0K0K1D8 114 aa6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 RNASE3P12724 160 aaKnown RBP6.18□□□□□ -1.42
CRNKL1-202ENST00000377340 MED14OSP0DP75 135 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 Q6ZVH6 145 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 C1orf158Q8N1D5 194 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 SPANXA1Q9NS26 97 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 U3KQK5 164 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 APCP25054 2843 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 IGLC6P0CF74 106 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 NBEAL2Q6ZNJ1 2754 aa6.17□□□□□ -1.42
CRNKL1-202ENST00000377340 MRPS12O15235 138 aaKnown RBP6.16□□□□□ -1.42
CRNKL1-202ENST00000377340 Q9H8V8 135 aa6.16□□□□□ -1.42
CRNKL1-202ENST00000377340 MDFIQ99750 246 aa6.16□□□□□ -1.42
CRNKL1-202ENST00000377340 LEPROTO15243 131 aa6.16□□□□□ -1.42
CRNKL1-202ENST00000377340 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
CRNKL1-202ENST00000377340 TENM4Q6N022 2769 aa6.15□□□□□ -1.42
CRNKL1-202ENST00000377340 REG3AQ06141 175 aa6.15□□□□□ -1.42
CRNKL1-202ENST00000377340 C20orf203Q8NBC4 194 aa6.15□□□□□ -1.42
CRNKL1-202ENST00000377340 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
CRNKL1-202ENST00000377340 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.43
CRNKL1-202ENST00000377340 J3QQQ9 107 aa6.15□□□□□ -1.43
CRNKL1-202ENST00000377340 NUPR1O60356 82 aa6.15□□□□□ -1.43
CRNKL1-202ENST00000377340 SPAG11BQ08648 103 aa6.15□□□□□ -1.43
CRNKL1-202ENST00000377340 Q6ZUT4 128 aa6.15□□□□□ -1.43
CRNKL1-202ENST00000377340 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 C15orf53Q8NAA6 179 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 H3BUT2 72 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 COX11Q9Y6N1 276 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 C10orf126Q8N4M7 172 aa6.14□□□□□ -1.43
CRNKL1-202ENST00000377340 M0QY20 66 aa6.13□□□□□ -1.43
CRNKL1-202ENST00000377340 SBSPONQ8IVN8 264 aa6.13□□□□□ -1.43
CRNKL1-202ENST00000377340 LINC00526Q96FQ7 95 aa6.13□□□□□ -1.43
CRNKL1-202ENST00000377340 TRBV6-8A0A0A6YYG3 113 aa6.13□□□□□ -1.43
CRNKL1-202ENST00000377340 FHL3Q13643 280 aa6.13□□□□□ -1.43
CRNKL1-202ENST00000377340 M0QXV9 152 aa6.13□□□□□ -1.43
CRNKL1-202ENST00000377340 RS1O15537 224 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 TDRG1Q3Y452 100 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 C5orf47Q569G3 176 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 IGHV4-4A0A075B6R2 117 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 DAND5Q8N907 189 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 CELSR2Q9HCU4 2923 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 TTTY13Q9BZ97 58 aa6.12□□□□□ -1.43
CRNKL1-202ENST00000377340 K7EMI3 77 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 SOCS3O14543 225 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 NDUFA1O15239 70 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 GAS8-AS1O95177 125 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 HSD52Q0P140 79 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 BEAN1Q3B7T3 259 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 LGALS9CQ6DKI2 356 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 CHCHD10Q8WYQ3 142 aaPredicted RBP6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 KMT2BQ9UMN6 2715 aaPredicted RBP6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
CRNKL1-202ENST00000377340 LAMTOR3Q9UHA4 124 aa6.1□□□□□ -1.43
CRNKL1-202ENST00000377340 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
CRNKL1-202ENST00000377340 A0A1B0GXF2 115 aa6.1□□□□□ -1.43
CRNKL1-202ENST00000377340 TIRAPP58753 221 aa6.1□□□□□ -1.43
CRNKL1-202ENST00000377340 STAB2Q8WWQ8 2551 aa6.1□□□□□ -1.43
CRNKL1-202ENST00000377340 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
CRNKL1-202ENST00000377340 NUPR2A6NF83 97 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 PCP2Q8IVA1 136 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 SCRT2Q9NQ03 307 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 C11orf86A6NJI1 115 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 TSPAN13O95857 204 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 KRTAP10-3P60369 221 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 COX7B2Q8TF08 81 aa6.09□□□□□ -1.43
CRNKL1-202ENST00000377340 ASPMQ8IZT6 3477 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms