RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ZFAND6Q6FIF0 208 aa18.24■□□□□ 0.51
C9orf40-201ENST00000376854 IGHV3OR16-12A0A075B7B8 117 aa18.23■□□□□ 0.51
C9orf40-201ENST00000376854 M0QXV9 152 aa18.23■□□□□ 0.51
C9orf40-201ENST00000376854 TRBV30A0A0K0K1B3 111 aa18.23■□□□□ 0.51
C9orf40-201ENST00000376854 TRIAP1O43715 76 aa18.23■□□□□ 0.51
C9orf40-201ENST00000376854 CLUHP3Q96NS8 147 aa18.23■□□□□ 0.51
C9orf40-201ENST00000376854 CDKN2A-AS1Q9UH64 79 aa18.23■□□□□ 0.51
C9orf40-201ENST00000376854 DGAT2L7PQ6IED9 249 aa18.22■□□□□ 0.51
C9orf40-201ENST00000376854 STHQ8IWL8 128 aa18.22■□□□□ 0.51
C9orf40-201ENST00000376854 NPC2P61916 151 aa18.22■□□□□ 0.51
C9orf40-201ENST00000376854 Q6ZSV7 163 aa18.21■□□□□ 0.51
C9orf40-201ENST00000376854 TIRAPP58753 221 aa18.2■□□□□ 0.5
C9orf40-201ENST00000376854 LINC01620Q4KN68 170 aa18.2■□□□□ 0.5
C9orf40-201ENST00000376854 C1orf158Q8N1D5 194 aa18.2■□□□□ 0.5
C9orf40-201ENST00000376854 C11orf44Q8N8P7 122 aa18.2■□□□□ 0.5
C9orf40-201ENST00000376854 TRGV1A0A0A0MS02 117 aa18.2■□□□□ 0.5
C9orf40-201ENST00000376854 MT-ATP8P03928 68 aa18.2■□□□□ 0.5
C9orf40-201ENST00000376854 XGP55808 180 aa18.19■□□□□ 0.5
C9orf40-201ENST00000376854 IGLV5-45A0A087WSX0 123 aa18.18■□□□□ 0.5
C9orf40-201ENST00000376854 TRAV25A0A0B4J276 109 aa18.18■□□□□ 0.5
C9orf40-201ENST00000376854 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.18■□□□□ 0.5
C9orf40-201ENST00000376854 TMEM101Q96IK0 257 aa18.18■□□□□ 0.5
C9orf40-201ENST00000376854 YAE1D1Q9NRH1 226 aa18.18■□□□□ 0.5
C9orf40-201ENST00000376854 ICOSQ9Y6W8 199 aa18.18■□□□□ 0.5
C9orf40-201ENST00000376854 SETD2Q9BYW2 2564 aaPredicted RBP18.18■□□□□ 0.5
C9orf40-201ENST00000376854 A0A1W2PRX2 142 aa18.17■□□□□ 0.5
C9orf40-201ENST00000376854 IL17DQ8TAD2 202 aa18.17■□□□□ 0.5
C9orf40-201ENST00000376854 NIPBLQ6KC79 2804 aaeCLIP18.17■□□□□ 0.5
C9orf40-201ENST00000376854 TIMM17BO60830 172 aa18.17■□□□□ 0.5
C9orf40-201ENST00000376854 TMEM86BQ8N661 226 aa18.17■□□□□ 0.5
C9orf40-201ENST00000376854 DNAJC9-AS1A6NH13 148 aa18.16■□□□□ 0.5
C9orf40-201ENST00000376854 COX6A2Q02221 97 aa18.16■□□□□ 0.5
C9orf40-201ENST00000376854 A0A1B0GV72 72 aa18.16■□□□□ 0.5
C9orf40-201ENST00000376854 NDUFA1O15239 70 aa18.15■□□□□ 0.5
C9orf40-201ENST00000376854 WNK1Q9H4A3 2382 aa18.15■□□□□ 0.5
C9orf40-201ENST00000376854 RNF183Q96D59 192 aa18.15■□□□□ 0.5
C9orf40-201ENST00000376854 DAND5Q8N907 189 aa18.14■□□□□ 0.49
C9orf40-201ENST00000376854 ESM1Q9NQ30 184 aa18.14■□□□□ 0.49
C9orf40-201ENST00000376854 TMEM262E9PQX1 116 aa18.14■□□□□ 0.49
C9orf40-201ENST00000376854 LINC00694P0DN24 101 aa18.14■□□□□ 0.49
C9orf40-201ENST00000376854 IFITM1P13164 125 aa18.14■□□□□ 0.49
C9orf40-201ENST00000376854 NTN5Q8WTR8 489 aaPredicted RBP18.14■□□□□ 0.49
C9orf40-201ENST00000376854 HERVK_113P63121 156 aa18.13■□□□□ 0.49
C9orf40-201ENST00000376854 TRBV10-2A0A0K0K1G8 114 aa18.12■□□□□ 0.49
C9orf40-201ENST00000376854 RPL36AP83881 106 aaKnown RBP18.12■□□□□ 0.49
C9orf40-201ENST00000376854 LINC00242Q5T6M2 205 aa18.12■□□□□ 0.49
C9orf40-201ENST00000376854 RPL36ALQ969Q0 106 aaKnown RBP18.12■□□□□ 0.49
C9orf40-201ENST00000376854 K7EQD1 137 aa18.12■□□□□ 0.49
C9orf40-201ENST00000376854 CCL24O00175 119 aa18.12■□□□□ 0.49
C9orf40-201ENST00000376854 Q6ZTI0 123 aa18.12■□□□□ 0.49
C9orf40-201ENST00000376854 ACANP16112 2415 aa18.12■□□□□ 0.49
C9orf40-201ENST00000376854 CIDEAO60543 219 aa18.11■□□□□ 0.49
C9orf40-201ENST00000376854 COX6CP09669 75 aa18.11■□□□□ 0.49
C9orf40-201ENST00000376854 CKS1BP61024 79 aa18.11■□□□□ 0.49
C9orf40-201ENST00000376854 PDZD2O15018 2839 aa18.1■□□□□ 0.49
C9orf40-201ENST00000376854 LINC01600Q96MT4 127 aa18.1■□□□□ 0.49
C9orf40-201ENST00000376854 IGLV5-39A0A0G2JS06 123 aa18.1■□□□□ 0.49
C9orf40-201ENST00000376854 TRBV10-1A0A0K0K1A3 114 aa18.1■□□□□ 0.49
C9orf40-201ENST00000376854 CIRBPQ14011 172 aaKnown RBP18.1■□□□□ 0.49
C9orf40-201ENST00000376854 NDUFA7O95182 113 aa18.09■□□□□ 0.49
C9orf40-201ENST00000376854 NTM-AS1Q6ZSK4 140 aa18.09■□□□□ 0.49
C9orf40-201ENST00000376854 RPL13AP40429 203 aaKnown RBP18.09■□□□□ 0.49
C9orf40-201ENST00000376854 DAZ2Q13117 558 aaKnown RBP18.09■□□□□ 0.49
C9orf40-201ENST00000376854 DAZ4Q86SG3 579 aaKnown RBP18.09■□□□□ 0.49
C9orf40-201ENST00000376854 Q9H8V8 135 aa18.09■□□□□ 0.49
C9orf40-201ENST00000376854 DAZ3Q9NR90 486 aaKnown RBP18.09■□□□□ 0.49
C9orf40-201ENST00000376854 ANK3Q12955 4377 aaKnown RBP18.08■□□□□ 0.49
C9orf40-201ENST00000376854 CSDC2Q9Y534 153 aaKnown RBP18.07■□□□□ 0.48
C9orf40-201ENST00000376854 TRAV13-1A0A0B4J241 112 aa18.07■□□□□ 0.48
C9orf40-201ENST00000376854 TRAV4A0A0B4J268 109 aa18.07■□□□□ 0.48
C9orf40-201ENST00000376854 FAM19A3Q7Z5A8 133 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 ITPR2Q14571 2701 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 GAGE12JA6NER3 117 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 GAGE4Q13068 117 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 GAGE5Q13069 117 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 CLEC2BQ92478 149 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 MTORP42345 2549 aa18.06■□□□□ 0.48
C9orf40-201ENST00000376854 TEX49A0A1B0GTD5 131 aa18.05■□□□□ 0.48
C9orf40-201ENST00000376854 C2orf82Q6UX34 121 aa18.05■□□□□ 0.48
C9orf40-201ENST00000376854 ZNF625Q96I27 306 aaPredicted RBP18.05■□□□□ 0.48
C9orf40-201ENST00000376854 SMIM1B2RUZ4 78 aa18.05■□□□□ 0.48
C9orf40-201ENST00000376854 H7C423 109 aa18.05■□□□□ 0.48
C9orf40-201ENST00000376854 NOP10Q9NPE3 64 aaKnown RBP18.05■□□□□ 0.48
C9orf40-201ENST00000376854 LINC00308Q8TCZ7 52 aa18.04■□□□□ 0.48
C9orf40-201ENST00000376854 TEX29Q8N6K0 151 aa18.04■□□□□ 0.48
C9orf40-201ENST00000376854 CITED2Q99967 270 aaPredicted RBP18.03■□□□□ 0.48
C9orf40-201ENST00000376854 SETXQ7Z333 2677 aaKnown RBP18.03■□□□□ 0.48
C9orf40-201ENST00000376854 UBE2WQ96B02 151 aa18.03■□□□□ 0.48
C9orf40-201ENST00000376854 A0A0U1RRA0 63 aa18.02■□□□□ 0.48
C9orf40-201ENST00000376854 KRTAP1-1Q07627 177 aa18.02■□□□□ 0.48
C9orf40-201ENST00000376854 CDC42SE2Q9NRR3 84 aa18.02■□□□□ 0.48
C9orf40-201ENST00000376854 LST1O00453 97 aa18.01■□□□□ 0.47
C9orf40-201ENST00000376854 JMJD1CQ15652 2540 aa18■□□□□ 0.47
C9orf40-201ENST00000376854 H3BT86 120 aa18■□□□□ 0.47
C9orf40-201ENST00000376854 GIG44P09565 113 aaPredicted RBP17.99■□□□□ 0.47
C9orf40-201ENST00000376854 PRIMA1Q86XR5 153 aa17.98■□□□□ 0.47
C9orf40-201ENST00000376854 F5H768 121 aa17.98■□□□□ 0.47
C9orf40-201ENST00000376854 TRAV8-4A0A0B4J246 113 aa17.97■□□□□ 0.47
C9orf40-201ENST00000376854 UBE2L6O14933 153 aa17.97■□□□□ 0.47
C9orf40-201ENST00000376854 MEIG1Q5JSS6 88 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms