RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TRGV2A0A075B6R0 118 aa15.42■□□□□ 0.06
RNF39-202ENST00000376751 TINCRA0A1B0GVN0 87 aa15.42■□□□□ 0.06
RNF39-202ENST00000376751 TRAV8-3A0A0A6YYJ7 113 aa15.42■□□□□ 0.06
RNF39-202ENST00000376751 IGHV3-30-3P0DP02 117 aa15.42■□□□□ 0.06
RNF39-202ENST00000376751 TIMM21Q9BVV7 248 aa15.42■□□□□ 0.06
RNF39-202ENST00000376751 LOC100131303A0A0U1RQF7 123 aa15.41■□□□□ 0.06
RNF39-202ENST00000376751 IGHV3-30P01768 117 aa15.41■□□□□ 0.06
RNF39-202ENST00000376751 IGHV3-30-5P0DP03 117 aa15.41■□□□□ 0.06
RNF39-202ENST00000376751 UBE2D1P51668 147 aa15.41■□□□□ 0.06
RNF39-202ENST00000376751 C10orf126Q8N4M7 172 aa15.4■□□□□ 0.06
RNF39-202ENST00000376751 DAZ4Q86SG3 579 aaKnown RBP15.4■□□□□ 0.06
RNF39-202ENST00000376751 SBSPONQ8IVN8 264 aa15.4■□□□□ 0.06
RNF39-202ENST00000376751 DAZ3Q9NR90 486 aaKnown RBP15.4■□□□□ 0.06
RNF39-202ENST00000376751 TMEM238LA0A1B0GVL6 79 aa15.38■□□□□ 0.05
RNF39-202ENST00000376751 A6NJY4 79 aa15.38■□□□□ 0.05
RNF39-202ENST00000376751 SPINK8P0C7L1 97 aa15.38■□□□□ 0.05
RNF39-202ENST00000376751 CRLF1O75462 422 aa15.37■□□□□ 0.05
RNF39-202ENST00000376751 ATRQ13535 2644 aa15.37■□□□□ 0.05
RNF39-202ENST00000376751 IGHV1-58A0A0C4DH39 117 aa15.36■□□□□ 0.05
RNF39-202ENST00000376751 DGAT2L7PQ6IED9 249 aa15.36■□□□□ 0.05
RNF39-202ENST00000376751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.36■□□□□ 0.05
RNF39-202ENST00000376751 A8MZ25 164 aa15.36■□□□□ 0.05
RNF39-202ENST00000376751 VSIG2Q96IQ7 327 aa15.36■□□□□ 0.05
RNF39-202ENST00000376751 A0A0J9YXY3 114 aa15.35■□□□□ 0.05
RNF39-202ENST00000376751 PGPEP1Q9NXJ5 209 aa15.35■□□□□ 0.05
RNF39-202ENST00000376751 TRGV4A0A0C4DH28 118 aa15.35■□□□□ 0.05
RNF39-202ENST00000376751 TRBV6-4A0A1B0GX49 114 aa15.35■□□□□ 0.05
RNF39-202ENST00000376751 FHL2Q14192 279 aa15.35■□□□□ 0.05
RNF39-202ENST00000376751 GEMIN7Q9H840 131 aaKnown RBP15.35■□□□□ 0.05
RNF39-202ENST00000376751 CDKN2A-AS1Q9UH64 79 aa15.35■□□□□ 0.05
RNF39-202ENST00000376751 IGLV5-45A0A087WSX0 123 aa15.34■□□□□ 0.05
RNF39-202ENST00000376751 APOMO95445 188 aa15.34■□□□□ 0.05
RNF39-202ENST00000376751 COX6A2Q02221 97 aa15.34■□□□□ 0.05
RNF39-202ENST00000376751 C9orf66Q5T8R8 295 aa15.34■□□□□ 0.05
RNF39-202ENST00000376751 TEP1Q99973 2627 aaKnown RBP15.34■□□□□ 0.05
RNF39-202ENST00000376751 INSL3P51460 131 aa15.33■□□□□ 0.05
RNF39-202ENST00000376751 NBEAL2Q6ZNJ1 2754 aa15.33■□□□□ 0.04
RNF39-202ENST00000376751 TIRAPP58753 221 aa15.33■□□□□ 0.04
RNF39-202ENST00000376751 OCIAD2Q56VL3 154 aa15.33■□□□□ 0.04
RNF39-202ENST00000376751 X6R8D5 127 aa15.33■□□□□ 0.04
RNF39-202ENST00000376751 CIDEAO60543 219 aa15.32■□□□□ 0.04
RNF39-202ENST00000376751 CFC1BP0CG36 223 aa15.32■□□□□ 0.04
RNF39-202ENST00000376751 CFC1P0CG37 223 aa15.32■□□□□ 0.04
RNF39-202ENST00000376751 CSDC2Q9Y534 153 aaKnown RBP15.32■□□□□ 0.04
RNF39-202ENST00000376751 TSPAN13O95857 204 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 RBX1P62877 108 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 LINC00242Q5T6M2 205 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 LITAFQ99732 161 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 CITED1Q99966 193 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 GTSF1LQ9H1H1 148 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 EIF4EBP3O60516 100 aaPredicted RBP15.31■□□□□ 0.04
RNF39-202ENST00000376751 NDUFA12Q9UI09 145 aa15.31■□□□□ 0.04
RNF39-202ENST00000376751 FOSL1P15407 271 aa15.3■□□□□ 0.04
RNF39-202ENST00000376751 TMEM243Q9BU79 118 aa15.3■□□□□ 0.04
RNF39-202ENST00000376751 DEFB130BP0DP73 79 aa15.29■□□□□ 0.04
RNF39-202ENST00000376751 DEFB130AP0DP74 79 aa15.29■□□□□ 0.04
RNF39-202ENST00000376751 LINC00612Q8N6U2 182 aa15.29■□□□□ 0.04
RNF39-202ENST00000376751 CDC42SE2Q9NRR3 84 aa15.29■□□□□ 0.04
RNF39-202ENST00000376751 TMEM238C9JI98 176 aa15.29■□□□□ 0.04
RNF39-202ENST00000376751 A4D1N5 150 aa15.28■□□□□ 0.04
RNF39-202ENST00000376751 FAM19A3Q7Z5A8 133 aa15.28■□□□□ 0.04
RNF39-202ENST00000376751 MUSTN1Q8IVN3 82 aa15.28■□□□□ 0.04
RNF39-202ENST00000376751 KIR2DL5BQ8NHK3 375 aa15.28■□□□□ 0.04
RNF39-202ENST00000376751 TRAV13-1A0A0B4J241 112 aa15.27■□□□□ 0.04
RNF39-202ENST00000376751 ZFAND6Q6FIF0 208 aa15.27■□□□□ 0.04
RNF39-202ENST00000376751 TMEM101Q96IK0 257 aa15.27■□□□□ 0.04
RNF39-202ENST00000376751 H3BMG7 143 aa15.26■□□□□ 0.03
RNF39-202ENST00000376751 HERVK_113P63121 156 aa15.26■□□□□ 0.03
RNF39-202ENST00000376751 ADAMTSL4-AS1Q5T5F5 129 aa15.26■□□□□ 0.03
RNF39-202ENST00000376751 SFTA2Q6UW10 78 aa15.26■□□□□ 0.03
RNF39-202ENST00000376751 UBE2L6O14933 153 aa15.25■□□□□ 0.03
RNF39-202ENST00000376751 TRRAPQ9Y4A5 3859 aa15.25■□□□□ 0.03
RNF39-202ENST00000376751 IGLV5-39A0A0G2JS06 123 aa15.24■□□□□ 0.03
RNF39-202ENST00000376751 GAGE6Q13070 117 aa15.23■□□□□ 0.03
RNF39-202ENST00000376751 F8P00451 2351 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 RPL24P83731 157 aaKnown RBP15.22■□□□□ 0.03
RNF39-202ENST00000376751 SMAGPQ0VAQ4 97 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 RNF151Q2KHN1 245 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 SMIM9A6NGZ8 99 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 SMIM1B2RUZ4 78 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 DEFB135Q30KP9 77 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 PRO1854Q9UHT4 67 aa15.22■□□□□ 0.03
RNF39-202ENST00000376751 TRBV6-8A0A0A6YYG3 113 aa15.21■□□□□ 0.03
RNF39-202ENST00000376751 NDUFA1O15239 70 aa15.21■□□□□ 0.03
RNF39-202ENST00000376751 MTURNQ8N3F0 131 aa15.21■□□□□ 0.03
RNF39-202ENST00000376751 SPANXDQ9BXN6 97 aa15.21■□□□□ 0.03
RNF39-202ENST00000376751 SPANXCQ9NY87 97 aa15.21■□□□□ 0.03
RNF39-202ENST00000376751 LOC107984156A0A0G2JMH3 177 aa15.2■□□□□ 0.02
RNF39-202ENST00000376751 F5H768 121 aa15.2■□□□□ 0.02
RNF39-202ENST00000376751 H7C423 109 aa15.2■□□□□ 0.02
RNF39-202ENST00000376751 ARL17AQ8IVW1 177 aa15.2■□□□□ 0.02
RNF39-202ENST00000376751 PRO0461Q9UI25 63 aa15.2■□□□□ 0.02
RNF39-202ENST00000376751 WFDC2Q14508 124 aa15.2■□□□□ 0.02
RNF39-202ENST00000376751 A0A0B4J2C4 111 aa15.19■□□□□ 0.02
RNF39-202ENST00000376751 MIAQ16674 131 aa15.19■□□□□ 0.02
RNF39-202ENST00000376751 FAM222AQ5U5X8 452 aa15.19■□□□□ 0.02
RNF39-202ENST00000376751 IGLV4-60A0A075B6I1 120 aa15.18■□□□□ 0.02
RNF39-202ENST00000376751 DEFB4AO15263 64 aa15.18■□□□□ 0.02
RNF39-202ENST00000376751 IGHV3-33P01772 117 aa15.18■□□□□ 0.02
RNF39-202ENST00000376751 GYPEP15421 78 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms