RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 SIVA1O15304 175 aa12.4□□□□□ -0.42
CTTN-203ENST00000376561 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
CTTN-203ENST00000376561 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
CTTN-203ENST00000376561 RETNQ9HD89 108 aa12.4□□□□□ -0.42
CTTN-203ENST00000376561 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
CTTN-203ENST00000376561 TMEM97Q5BJF2 176 aa12.39□□□□□ -0.43
CTTN-203ENST00000376561 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
CTTN-203ENST00000376561 MPV17L2Q567V2 206 aa12.39□□□□□ -0.43
CTTN-203ENST00000376561 CSDC2Q9Y534 153 aaKnown RBP12.39□□□□□ -0.43
CTTN-203ENST00000376561 PAX4O43316 350 aa12.38□□□□□ -0.43
CTTN-203ENST00000376561 ATP5G1P05496 136 aa12.38□□□□□ -0.43
CTTN-203ENST00000376561 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
CTTN-203ENST00000376561 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
CTTN-203ENST00000376561 HERVK_113P61574 105 aa12.38□□□□□ -0.43
CTTN-203ENST00000376561 UBE2L6O14933 153 aa12.37□□□□□ -0.43
CTTN-203ENST00000376561 ATP6V0E2Q8NHE4 81 aa12.37□□□□□ -0.43
CTTN-203ENST00000376561 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
CTTN-203ENST00000376561 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
CTTN-203ENST00000376561 MDFIQ99750 246 aa12.37□□□□□ -0.43
CTTN-203ENST00000376561 H7C423 109 aa12.36□□□□□ -0.43
CTTN-203ENST00000376561 VSIG2Q96IQ7 327 aa12.36□□□□□ -0.43
CTTN-203ENST00000376561 TEX48A0A1B0GUV7 120 aa12.35□□□□□ -0.43
CTTN-203ENST00000376561 A0A0J9YY99 117 aa12.35□□□□□ -0.43
CTTN-203ENST00000376561 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
CTTN-203ENST00000376561 TMEM223A0PJW6 202 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 UBE2D1P51668 147 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 HIGD1BQ9P298 99 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 F5H768 121 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 BVES-AS1Q5T3Y7 98 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
CTTN-203ENST00000376561 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
CTTN-203ENST00000376561 COL5A1-AS1Q5SY13 56 aa12.33□□□□□ -0.44
CTTN-203ENST00000376561 TRAV26-1A0A087WT03 109 aa12.33□□□□□ -0.44
CTTN-203ENST00000376561 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
CTTN-203ENST00000376561 TMEM101Q96IK0 257 aa12.33□□□□□ -0.44
CTTN-203ENST00000376561 HTN3P15516 51 aa12.32□□□□□ -0.44
CTTN-203ENST00000376561 GAGE6Q13070 117 aa12.32□□□□□ -0.44
CTTN-203ENST00000376561 CHCHD5Q9BSY4 110 aa12.32□□□□□ -0.44
CTTN-203ENST00000376561 A0A096LPF7 62 aa12.31□□□□□ -0.44
CTTN-203ENST00000376561 A0A1B0GV90 55 aa12.31□□□□□ -0.44
CTTN-203ENST00000376561 ZNF25P17030 456 aaPredicted RBP12.31□□□□□ -0.44
CTTN-203ENST00000376561 C12orf74Q32Q52 190 aa12.31□□□□□ -0.44
CTTN-203ENST00000376561 HSD52Q0P140 79 aa12.31□□□□□ -0.44
CTTN-203ENST00000376561 ZNF815PA8K554 130 aa12.3□□□□□ -0.44
CTTN-203ENST00000376561 TSPEAR-AS2P59090 65 aa12.3□□□□□ -0.44
CTTN-203ENST00000376561 C11orf68Q9H3H3 251 aaKnown RBP12.3□□□□□ -0.44
CTTN-203ENST00000376561 GEMIN7Q9H840 131 aaKnown RBP12.3□□□□□ -0.44
CTTN-203ENST00000376561 TIRAPP58753 221 aa12.29□□□□□ -0.44
CTTN-203ENST00000376561 IGHV3-64A0A075B6Q5 118 aa12.29□□□□□ -0.44
CTTN-203ENST00000376561 J3QQQ9 107 aa12.29□□□□□ -0.44
CTTN-203ENST00000376561 LEPROTO15243 131 aa12.29□□□□□ -0.44
CTTN-203ENST00000376561 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
CTTN-203ENST00000376561 K7EIL1 84 aa12.28□□□□□ -0.44
CTTN-203ENST00000376561 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
CTTN-203ENST00000376561 FAM19A3Q7Z5A8 133 aa12.28□□□□□ -0.44
CTTN-203ENST00000376561 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.44
CTTN-203ENST00000376561 TRAV13-1A0A0B4J241 112 aa12.27□□□□□ -0.44
CTTN-203ENST00000376561 KPRPQ5T749 579 aaPredicted RBP12.27□□□□□ -0.44
CTTN-203ENST00000376561 NBEAL1Q6ZS30 2694 aa12.27□□□□□ -0.44
CTTN-203ENST00000376561 IGLV5-45A0A087WSX0 123 aa12.27□□□□□ -0.45
CTTN-203ENST00000376561 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
CTTN-203ENST00000376561 HERVK_113P63121 156 aa12.26□□□□□ -0.45
CTTN-203ENST00000376561 SEC11AP67812 179 aa12.26□□□□□ -0.45
CTTN-203ENST00000376561 COX6A2Q02221 97 aa12.26□□□□□ -0.45
CTTN-203ENST00000376561 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
CTTN-203ENST00000376561 CDKN2A-AS1Q9UH64 79 aa12.26□□□□□ -0.45
CTTN-203ENST00000376561 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
CTTN-203ENST00000376561 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
CTTN-203ENST00000376561 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
CTTN-203ENST00000376561 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
CTTN-203ENST00000376561 ORAOV1Q8WV07 137 aa12.25□□□□□ -0.45
CTTN-203ENST00000376561 ICOSQ9Y6W8 199 aa12.25□□□□□ -0.45
CTTN-203ENST00000376561 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
CTTN-203ENST00000376561 SCGB1D4Q6XE38 83 aa12.25□□□□□ -0.45
CTTN-203ENST00000376561 SPINK8P0C7L1 97 aa12.24□□□□□ -0.45
CTTN-203ENST00000376561 DEFB121Q5J5C9 76 aa12.24□□□□□ -0.45
CTTN-203ENST00000376561 Q6ZTC4 211 aa12.24□□□□□ -0.45
CTTN-203ENST00000376561 TENM3Q9P273 2699 aa12.24□□□□□ -0.45
CTTN-203ENST00000376561 MGAM2Q2M2H8 2515 aa12.24□□□□□ -0.45
CTTN-203ENST00000376561 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
CTTN-203ENST00000376561 H3BRM9 83 aa12.23□□□□□ -0.45
CTTN-203ENST00000376561 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
CTTN-203ENST00000376561 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
CTTN-203ENST00000376561 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
CTTN-203ENST00000376561 GCSHP23434 173 aa12.22□□□□□ -0.45
CTTN-203ENST00000376561 TAL2Q16559 108 aa12.22□□□□□ -0.45
CTTN-203ENST00000376561 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
CTTN-203ENST00000376561 RBX1P62877 108 aa12.21□□□□□ -0.45
CTTN-203ENST00000376561 CEND1Q8N111 149 aa12.21□□□□□ -0.45
CTTN-203ENST00000376561 HIST1H4GQ99525 98 aa12.21□□□□□ -0.45
CTTN-203ENST00000376561 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.46
CTTN-203ENST00000376561 MRAPQ8TCY5 172 aa12.21□□□□□ -0.46
CTTN-203ENST00000376561 TM2D2Q9BX73 214 aa12.21□□□□□ -0.46
CTTN-203ENST00000376561 FXYD2P54710 66 aa12.2□□□□□ -0.46
CTTN-203ENST00000376561 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
CTTN-203ENST00000376561 H3BNG1 76 aa12.19□□□□□ -0.46
CTTN-203ENST00000376561 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms