RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LITAFQ99732 161 aa8.99□□□□□ -0.97
C9orf3-203ENST00000375315 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
C9orf3-203ENST00000375315 MIAQ16674 131 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 OTOGQ6ZRI0 2925 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 ADARB2-AS1A8MUL3 147 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 TRBV12-3P01733 135 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 KHDC1LQ5JSQ8 128 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 C16orf92Q96LL3 132 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 F5H697 171 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 HIST1H4AP62805 103 aaKnown RBP8.98□□□□□ -0.97
C9orf3-203ENST00000375315 RHOHQ15669 191 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 LINC00477Q96M19 166 aa8.98□□□□□ -0.97
C9orf3-203ENST00000375315 A0A0J9YXV3 536 aa8.97□□□□□ -0.97
C9orf3-203ENST00000375315 SUMO4Q6EEV6 95 aa8.97□□□□□ -0.97
C9orf3-203ENST00000375315 TRBV27A0A0K0K1C4 114 aa8.97□□□□□ -0.97
C9orf3-203ENST00000375315 Q6ZSV7 163 aa8.97□□□□□ -0.97
C9orf3-203ENST00000375315 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
C9orf3-203ENST00000375315 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.97
C9orf3-203ENST00000375315 KIR2DL5BQ8NHK3 375 aa8.96□□□□□ -0.97
C9orf3-203ENST00000375315 F8P00451 2351 aa8.96□□□□□ -0.97
C9orf3-203ENST00000375315 TRBV7-1A0A0A6YYK4 115 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 A6NDX4 124 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 IGF1P05019 195 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 HRCT1Q6UXD1 115 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 DAND5Q8N907 189 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 ZNF580Q9UK33 172 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 LINC00315P59091 139 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 NPC2P61916 151 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 RPL18AQ02543 176 aaKnown RBP8.96□□□□□ -0.98
C9orf3-203ENST00000375315 ADAMTSL4-AS1Q5T5F5 129 aa8.96□□□□□ -0.98
C9orf3-203ENST00000375315 NIPBLQ6KC79 2804 aaeCLIP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 GNRH2O43555 120 aa8.95□□□□□ -0.98
C9orf3-203ENST00000375315 NXPH4O95158 308 aa8.95□□□□□ -0.98
C9orf3-203ENST00000375315 INAFM2P0DMQ5 153 aa8.95□□□□□ -0.98
C9orf3-203ENST00000375315 RNASE3P12724 160 aaKnown RBP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 DAZ2Q13117 558 aaKnown RBP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 NSUN5P1Q3KNT7 163 aa8.95□□□□□ -0.98
C9orf3-203ENST00000375315 C9orf139Q6ZV77 190 aa8.95□□□□□ -0.98
C9orf3-203ENST00000375315 DAZ4Q86SG3 579 aaKnown RBP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 FAM110DQ8TAY7 271 aaPredicted RBP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 DAZ1Q9NQZ3 744 aaKnown RBP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 DAZ3Q9NR90 486 aaKnown RBP8.95□□□□□ -0.98
C9orf3-203ENST00000375315 HIVEP1P15822 2718 aa8.95□□□□□ -0.98
C9orf3-203ENST00000375315 TRBV6-5A0A0K0K1A5 114 aa8.94□□□□□ -0.98
C9orf3-203ENST00000375315 RPL11P62913 178 aaKnown RBP8.94□□□□□ -0.98
C9orf3-203ENST00000375315 TRAV12-3A0A0B4J271 114 aa8.94□□□□□ -0.98
C9orf3-203ENST00000375315 SERP2Q8N6R1 65 aa8.94□□□□□ -0.98
C9orf3-203ENST00000375315 DSCR8Q96T75 97 aa8.94□□□□□ -0.98
C9orf3-203ENST00000375315 CLPSL1A2RUU4 121 aa8.94□□□□□ -0.98
C9orf3-203ENST00000375315 COX7A2LO14548 114 aa8.94□□□□□ -0.98
C9orf3-203ENST00000375315 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
C9orf3-203ENST00000375315 CCDC140Q96MF4 163 aa8.93□□□□□ -0.98
C9orf3-203ENST00000375315 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
C9orf3-203ENST00000375315 CYSTM1Q9H1C7 97 aa8.93□□□□□ -0.98
C9orf3-203ENST00000375315 A0A087WWL8 130 aa8.92□□□□□ -0.98
C9orf3-203ENST00000375315 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
C9orf3-203ENST00000375315 C2CD3Q4AC94 2353 aa8.92□□□□□ -0.98
C9orf3-203ENST00000375315 BAALC-AS2P0C853 105 aa8.92□□□□□ -0.98
C9orf3-203ENST00000375315 TIRAPP58753 221 aa8.92□□□□□ -0.98
C9orf3-203ENST00000375315 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 Q5XG85 94 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 C20orf203Q8NBC4 194 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 BAHCC1Q9P281 2608 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 J3QLI3 93 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 IGHG2P01859 326 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 EDN2P20800 178 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 DEFB136Q30KP8 78 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 JPT2Q9H910 190 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 A0A1W2PRX2 142 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 TIMM17BO60830 172 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 OXTP01178 125 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
C9orf3-203ENST00000375315 C20orf173Q96LM9 149 aa8.9□□□□□ -0.98
C9orf3-203ENST00000375315 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
C9orf3-203ENST00000375315 FAM19A4Q96LR4 140 aa8.9□□□□□ -0.98
C9orf3-203ENST00000375315 UPK3BQ9BT76 320 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 MRPS36P82909 103 aaKnown RBP8.89□□□□□ -0.99
C9orf3-203ENST00000375315 FAM74A4Q5TZK3 123 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 C18orf65Q6ZTR6 163 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 RNF152Q8N8N0 203 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 CD28P10747 220 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 DEFB1P60022 68 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 Q6YL49 198 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
C9orf3-203ENST00000375315 ATRQ13535 2644 aa8.88□□□□□ -0.99
C9orf3-203ENST00000375315 SYNJ2BPP57105 145 aa8.88□□□□□ -0.99
C9orf3-203ENST00000375315 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
C9orf3-203ENST00000375315 VSIG2Q96IQ7 327 aa8.88□□□□□ -0.99
C9orf3-203ENST00000375315 U3KQE9 123 aa8.88□□□□□ -0.99
C9orf3-203ENST00000375315 DNAL4O96015 105 aa8.87□□□□□ -0.99
C9orf3-203ENST00000375315 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
C9orf3-203ENST00000375315 ESM1Q9NQ30 184 aa8.87□□□□□ -0.99
C9orf3-203ENST00000375315 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
C9orf3-203ENST00000375315 Q6JHZ5 121 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms