RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CIRBPQ14011 172 aaKnown RBP12.97□□□□□ -0.33
PHF1-201ENST00000374512 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
PHF1-201ENST00000374512 NTN5Q8WTR8 489 aaPredicted RBP12.97□□□□□ -0.33
PHF1-201ENST00000374512 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.34
PHF1-201ENST00000374512 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.34
PHF1-201ENST00000374512 PRM2P04554 102 aa12.95□□□□□ -0.34
PHF1-201ENST00000374512 HERVK_113P63121 156 aa12.95□□□□□ -0.34
PHF1-201ENST00000374512 TEX29Q8N6K0 151 aa12.95□□□□□ -0.34
PHF1-201ENST00000374512 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
PHF1-201ENST00000374512 TEX15Q9BXT5 2789 aa12.95□□□□□ -0.34
PHF1-201ENST00000374512 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
PHF1-201ENST00000374512 CDKN2A-AS1Q9UH64 79 aa12.94□□□□□ -0.34
PHF1-201ENST00000374512 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
PHF1-201ENST00000374512 TMEM86BQ8N661 226 aa12.94□□□□□ -0.34
PHF1-201ENST00000374512 CITED1Q99966 193 aa12.94□□□□□ -0.34
PHF1-201ENST00000374512 CSDC2Q9Y534 153 aaKnown RBP12.94□□□□□ -0.34
PHF1-201ENST00000374512 UBE2WQ96B02 151 aa12.93□□□□□ -0.34
PHF1-201ENST00000374512 TMEM101Q96IK0 257 aa12.93□□□□□ -0.34
PHF1-201ENST00000374512 IGLV5-39A0A0G2JS06 123 aa12.93□□□□□ -0.34
PHF1-201ENST00000374512 C2orf82Q6UX34 121 aa12.93□□□□□ -0.34
PHF1-201ENST00000374512 IGHV3-38A0A0C4DH36 116 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 TRBV10-1A0A0K0K1A3 114 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 LST1O00453 97 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 A8MZ25 164 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 H7C423 109 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 WFDC11Q8NEX6 87 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 IL17DQ8TAD2 202 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 APCP25054 2843 aa12.92□□□□□ -0.34
PHF1-201ENST00000374512 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
PHF1-201ENST00000374512 IGHV3OR16-12A0A075B7B8 117 aa12.9□□□□□ -0.34
PHF1-201ENST00000374512 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.34
PHF1-201ENST00000374512 TEX49A0A1B0GTD5 131 aa12.9□□□□□ -0.34
PHF1-201ENST00000374512 SNCGO76070 127 aa12.9□□□□□ -0.34
PHF1-201ENST00000374512 Q6ZSV7 163 aa12.9□□□□□ -0.34
PHF1-201ENST00000374512 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
PHF1-201ENST00000374512 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
PHF1-201ENST00000374512 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
PHF1-201ENST00000374512 RPL36AP83881 106 aaKnown RBP12.89□□□□□ -0.35
PHF1-201ENST00000374512 LINC00242Q5T6M2 205 aa12.89□□□□□ -0.35
PHF1-201ENST00000374512 Q6Q795 121 aa12.89□□□□□ -0.35
PHF1-201ENST00000374512 RPL36ALQ969Q0 106 aaKnown RBP12.89□□□□□ -0.35
PHF1-201ENST00000374512 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
PHF1-201ENST00000374512 CHD6Q8TD26 2715 aa12.89□□□□□ -0.35
PHF1-201ENST00000374512 STHQ8IWL8 128 aa12.88□□□□□ -0.35
PHF1-201ENST00000374512 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
PHF1-201ENST00000374512 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
PHF1-201ENST00000374512 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.88□□□□□ -0.35
PHF1-201ENST00000374512 FAM240AA0A1B0GVK7 77 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 NPC2P61916 151 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 GAGE2BQ13066 116 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 ODF3L2Q3SX64 289 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 GAGE2EQ4V326 116 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 LINC00308Q8TCZ7 52 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 GAGE2DQ9UEU5 116 aa12.87□□□□□ -0.35
PHF1-201ENST00000374512 COX6A2Q02221 97 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 Q9H8V8 135 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 K7EQD1 137 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 C1orf158Q8N1D5 194 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 ANAPC13Q9BS18 74 aa12.86□□□□□ -0.35
PHF1-201ENST00000374512 TRGV1A0A0A0MS02 117 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 DNAJC9-AS1A6NH13 148 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 ITPR3Q14573 2671 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 HERV-K104P63124 156 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 HIST2H2BCQ6DN03 193 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 CLEC2BQ92478 149 aa12.85□□□□□ -0.35
PHF1-201ENST00000374512 CITED2Q99967 270 aaPredicted RBP12.85□□□□□ -0.35
PHF1-201ENST00000374512 SMIM1B2RUZ4 78 aa12.84□□□□□ -0.35
PHF1-201ENST00000374512 TLN2Q9Y4G6 2542 aa12.84□□□□□ -0.35
PHF1-201ENST00000374512 ZNF469Q96JG9 3925 aaPredicted RBP12.84□□□□□ -0.35
PHF1-201ENST00000374512 DAND5Q8N907 189 aa12.83□□□□□ -0.36
PHF1-201ENST00000374512 CMC4P56277 68 aaPredicted RBP12.82□□□□□ -0.36
PHF1-201ENST00000374512 CDC42SE2Q9NRR3 84 aa12.82□□□□□ -0.36
PHF1-201ENST00000374512 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
PHF1-201ENST00000374512 ZNF625Q96I27 306 aaPredicted RBP12.82□□□□□ -0.36
PHF1-201ENST00000374512 NBPF19A0A087WUL8 3843 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 CCL24O00175 119 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 COX7A2LO14548 114 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 PLA2G2AP14555 144 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 SHISA2Q6UWI4 295 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
PHF1-201ENST00000374512 J3QKU1 62 aa12.8□□□□□ -0.36
PHF1-201ENST00000374512 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
PHF1-201ENST00000374512 F5H768 121 aa12.8□□□□□ -0.36
PHF1-201ENST00000374512 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
PHF1-201ENST00000374512 C15orf53Q8NAA6 179 aa12.8□□□□□ -0.36
PHF1-201ENST00000374512 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
PHF1-201ENST00000374512 ESM1Q9NQ30 184 aa12.79□□□□□ -0.36
PHF1-201ENST00000374512 TRAV13-1A0A0B4J241 112 aa12.78□□□□□ -0.36
PHF1-201ENST00000374512 CRLF1O75462 422 aa12.78□□□□□ -0.36
PHF1-201ENST00000374512 Q6ZTI0 123 aa12.78□□□□□ -0.36
PHF1-201ENST00000374512 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
PHF1-201ENST00000374512 KRTAP1-1Q07627 177 aa12.78□□□□□ -0.36
PHF1-201ENST00000374512 TTC32Q5I0X7 151 aa12.78□□□□□ -0.36
PHF1-201ENST00000374512 ACYP1P07311 99 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms