RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 LINC01006Q8NI28 216 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 IL17DQ8TAD2 202 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 AGRNO00468 2067 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 A0A0J9YXY3 114 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 NDUFA7O95182 113 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 SMAGPQ0VAQ4 97 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 A4D1N5 150 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 CCL24O00175 119 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 TIRAPP58753 221 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 C1QTNF4Q9BXJ3 329 aa10.07□□□□□ -0.8
HMGCL-203ENST00000374490 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 TRBV10-1A0A0K0K1A3 114 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 SH2D6Q7Z4S9 175 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
HMGCL-203ENST00000374490 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
HMGCL-203ENST00000374490 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 ERG28Q9UKR5 140 aa10.06□□□□□ -0.8
HMGCL-203ENST00000374490 WIPF1O43516 503 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 TIMM17BO60830 172 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 SCGB1A1P11684 91 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 C11orf44Q8N8P7 122 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 XCL2Q9UBD3 114 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
HMGCL-203ENST00000374490 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
HMGCL-203ENST00000374490 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
HMGCL-203ENST00000374490 A0A1W2PRX2 142 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
HMGCL-203ENST00000374490 M0QXV9 152 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 PRM2P04554 102 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 SCGB1C2P0DMR2 95 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 AZU1P20160 251 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 Q6ZUT4 128 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 RNF183Q96D59 192 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 IGLV5-45A0A087WSX0 123 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 TCL1BO95988 128 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
HMGCL-203ENST00000374490 ZFAND6Q6FIF0 208 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 DGAT2L7PQ6IED9 249 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 CEMP1Q6PRD7 247 aaPredicted RBP10.04□□□□□ -0.8
HMGCL-203ENST00000374490 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
HMGCL-203ENST00000374490 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 FAM110AQ9BQ89 295 aa10.04□□□□□ -0.8
HMGCL-203ENST00000374490 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
HMGCL-203ENST00000374490 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
HMGCL-203ENST00000374490 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
HMGCL-203ENST00000374490 CIDEAO60543 219 aa10.03□□□□□ -0.8
HMGCL-203ENST00000374490 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
HMGCL-203ENST00000374490 K7EQD1 137 aa10.02□□□□□ -0.81
HMGCL-203ENST00000374490 IFITM1P13164 125 aa10.02□□□□□ -0.81
HMGCL-203ENST00000374490 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-203ENST00000374490 FOXI1Q12951 378 aa10.02□□□□□ -0.81
HMGCL-203ENST00000374490 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
HMGCL-203ENST00000374490 MIAQ16674 131 aa10.02□□□□□ -0.81
HMGCL-203ENST00000374490 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
HMGCL-203ENST00000374490 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
HMGCL-203ENST00000374490 LITAFQ99732 161 aa10.02□□□□□ -0.81
HMGCL-203ENST00000374490 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
HMGCL-203ENST00000374490 CSDC2Q9Y534 153 aaKnown RBP10.02□□□□□ -0.81
HMGCL-203ENST00000374490 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
HMGCL-203ENST00000374490 HERVK_113P63121 156 aa10.01□□□□□ -0.81
HMGCL-203ENST00000374490 HIST2H2BDQ6DRA6 164 aa10.01□□□□□ -0.81
HMGCL-203ENST00000374490 FAM19A3Q7Z5A8 133 aa10.01□□□□□ -0.81
HMGCL-203ENST00000374490 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
HMGCL-203ENST00000374490 PPDPFLQ8WWR9 84 aa10.01□□□□□ -0.81
HMGCL-203ENST00000374490 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
HMGCL-203ENST00000374490 SFTA2Q6UW10 78 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 Q9UF83 564 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 IGHV3OR16-12A0A075B7B8 117 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 NDUFA1O15239 70 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 SPINK8P0C7L1 97 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 Q1RN00 199 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 C16orf74Q96GX8 76 aa10□□□□□ -0.81
HMGCL-203ENST00000374490 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
HMGCL-203ENST00000374490 ATXN8Q156A1 80 aa9.99□□□□□ -0.81
HMGCL-203ENST00000374490 EIF4EBP3O60516 100 aaPredicted RBP9.98□□□□□ -0.81
HMGCL-203ENST00000374490 CIRBPQ14011 172 aaKnown RBP9.98□□□□□ -0.81
HMGCL-203ENST00000374490 COPS9Q8WXC6 57 aa9.98□□□□□ -0.81
HMGCL-203ENST00000374490 SHISA2Q6UWI4 295 aa9.97□□□□□ -0.81
HMGCL-203ENST00000374490 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
HMGCL-203ENST00000374490 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
HMGCL-203ENST00000374490 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.81
HMGCL-203ENST00000374490 ADARB2-AS1A8MUL3 147 aa9.96□□□□□ -0.81
HMGCL-203ENST00000374490 H7C423 109 aa9.96□□□□□ -0.81
HMGCL-203ENST00000374490 PRSS2P07478 247 aa9.96□□□□□ -0.81
HMGCL-203ENST00000374490 LINC01600Q96MT4 127 aa9.96□□□□□ -0.81
HMGCL-203ENST00000374490 IGLV1-51P01701 117 aa9.96□□□□□ -0.82
HMGCL-203ENST00000374490 COX6CP09669 75 aa9.96□□□□□ -0.82
HMGCL-203ENST00000374490 Q6ZTI0 123 aa9.96□□□□□ -0.82
HMGCL-203ENST00000374490 TMEM101Q96IK0 257 aa9.96□□□□□ -0.82
HMGCL-203ENST00000374490 NACAE9PAV3 2078 aa9.96□□□□□ -0.82
HMGCL-203ENST00000374490 SLC25A20O43772 301 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms