RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 UBE2D4Q9Y2X8 147 aa8.68□□□□□ -1.02
HMGCL-202ENST00000374487 GIG44P09565 113 aaPredicted RBP8.67□□□□□ -1.02
HMGCL-202ENST00000374487 NACAE9PAV3 2078 aa8.67□□□□□ -1.02
HMGCL-202ENST00000374487 A0A1B0GWB2 263 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 MRPS36P82909 103 aaKnown RBP8.66□□□□□ -1.02
HMGCL-202ENST00000374487 RPL36AP83881 106 aaKnown RBP8.66□□□□□ -1.02
HMGCL-202ENST00000374487 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 SLC25A29Q8N8R3 303 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 RPL36ALQ969Q0 106 aaKnown RBP8.66□□□□□ -1.02
HMGCL-202ENST00000374487 FAM104AQ969W3 186 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 TRAV4A0A0B4J268 109 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
HMGCL-202ENST00000374487 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.02
HMGCL-202ENST00000374487 TRBV10-1A0A0K0K1A3 114 aa8.65□□□□□ -1.02
HMGCL-202ENST00000374487 K7EQD1 137 aa8.65□□□□□ -1.02
HMGCL-202ENST00000374487 DAZ2Q13117 558 aaKnown RBP8.65□□□□□ -1.02
HMGCL-202ENST00000374487 OCIAD2Q56VL3 154 aa8.65□□□□□ -1.02
HMGCL-202ENST00000374487 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
HMGCL-202ENST00000374487 SPANXB1Q9NS25 103 aaPredicted RBP8.65□□□□□ -1.02
HMGCL-202ENST00000374487 NOTCH1P46531 2555 aa8.65□□□□□ -1.03
HMGCL-202ENST00000374487 RRN3P1Q2M238 152 aa8.65□□□□□ -1.03
HMGCL-202ENST00000374487 Q6ZUT4 128 aa8.65□□□□□ -1.03
HMGCL-202ENST00000374487 NOTCH3Q9UM47 2321 aa8.64□□□□□ -1.03
HMGCL-202ENST00000374487 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
HMGCL-202ENST00000374487 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
HMGCL-202ENST00000374487 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE7O76087 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 APOMO95445 188 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 IGHV3-30-3P0DP02 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
HMGCL-202ENST00000374487 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
HMGCL-202ENST00000374487 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 RNF151Q2KHN1 245 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE12JA6NER3 117 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 UBE2D1P51668 147 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE4Q13068 117 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE5Q13069 117 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 GAGE13Q4V321 117 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 K7ERU9 68 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 WFDC9Q8NEX5 89 aa8.62□□□□□ -1.03
HMGCL-202ENST00000374487 TRAV8-3A0A0A6YYJ7 113 aa8.61□□□□□ -1.03
HMGCL-202ENST00000374487 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
HMGCL-202ENST00000374487 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
HMGCL-202ENST00000374487 RBX1P62877 108 aa8.61□□□□□ -1.03
HMGCL-202ENST00000374487 TMEM238C9JI98 176 aa8.61□□□□□ -1.03
HMGCL-202ENST00000374487 TRGV4A0A0C4DH28 118 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 H3BMG7 143 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 UBE2D3P61077 147 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 UBE2D2P62837 147 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 VSIG2Q96IQ7 327 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 OVOL2Q9BRP0 275 aa8.6□□□□□ -1.03
HMGCL-202ENST00000374487 CIDEAO60543 219 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 C10orf126Q8N4M7 172 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 DNAH3Q8TD57 4116 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 CFC1BP0CG36 223 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 CFC1P0CG37 223 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 LINC00694P0DN24 101 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
HMGCL-202ENST00000374487 TRBV6-4A0A1B0GX49 114 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 TSPAN13O95857 204 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
HMGCL-202ENST00000374487 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 CDKN2A-AS1Q9UH64 79 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 PRKDCP78527 4128 aaKnown RBP8.58□□□□□ -1.04
HMGCL-202ENST00000374487 F8W1H4 67 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 UBE2L6O14933 153 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 TIRAPP58753 221 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 VPS25Q9BRG1 176 aa8.58□□□□□ -1.04
HMGCL-202ENST00000374487 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
HMGCL-202ENST00000374487 A4D1N5 150 aa8.57□□□□□ -1.04
HMGCL-202ENST00000374487 A8MZ25 164 aa8.57□□□□□ -1.04
HMGCL-202ENST00000374487 HERVK_113P63121 156 aa8.57□□□□□ -1.04
HMGCL-202ENST00000374487 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
HMGCL-202ENST00000374487 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 LOC100131303A0A0U1RQF7 123 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 WIPF1O43516 503 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 PRSS2P07478 247 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 INSL3P51460 131 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 GTSF1LQ9H1H1 148 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
HMGCL-202ENST00000374487 DEFB130BP0DP73 79 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 DEFB130AP0DP74 79 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms